Xanthomonas citri pv. citri 306: XAC1880
Help
Entry
XAC1880 CDS
T00084
Symbol
rpfB
Name
(GenBank) RpfB protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xac
Xanthomonas citri pv. citri 306
Pathway
xac00061
Fatty acid biosynthesis
xac00071
Fatty acid degradation
xac01100
Metabolic pathways
xac01212
Fatty acid metabolism
xac02024
Quorum sensing
xac04146
Peroxisome
Module
xac_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xac00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XAC1880 (rpfB)
00071 Fatty acid degradation
XAC1880 (rpfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XAC1880 (rpfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
XAC1880 (rpfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xac01004
]
XAC1880 (rpfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xac04147
]
XAC1880 (rpfB)
Enzymes [BR:
xac01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XAC1880 (rpfB)
Lipid biosynthesis proteins [BR:
xac01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XAC1880 (rpfB)
Exosome [BR:
xac04147
]
Exosomal proteins
Exosomal proteins of breast milk
XAC1880 (rpfB)
Exosomal proteins of breast cancer cells
XAC1880 (rpfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAM36742
UniProt:
A0AAI8ESR7
LinkDB
All DBs
Position
complement(2182586..2184268)
Genome browser
AA seq
560 aa
AA seq
DB search
MNQARPWLQSYPAGVAAEIDLEQFRTVAEVFATSVKRFADRPAYHSFGKTITYREADQLV
EHFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLI
DSGASALVVIDNFGTTVQQVIADTPVRQVITTGLGDMLGFPKAALLNFVVKYVKKLVPDY
RINGAIRFREALALGRKHRVPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQA
HQWLAGTGKLEEGNEVVITALPPYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELK
KTRFTAFTGVNTLFNGLLNTPGFDQVDFSSLKMTLGGGMAVQRSVAERWKKVTGLTLVEA
YGLTETSPAACINPMDLKDYNGSIGVPIPSTDACIKDDAGNALPLGEIGELCIKGPQVMK
GDWKKPEETAKVMDAEGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA
ALPGVLEVAAVGVPDEKSGEIVKVVIVKKDPALTAEDVKAHARANLTAYKQPRVIEFRKE
LPKTNVGKILRRELRDSARP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggcacgtccttggttgcaaagttatccggccggcgttgccgccgaaatcgat
cttgagcagttccgcacggtggccgaggtgtttgccacctccgtgaaacgcttcgccgac
cggcctgcgtaccacagcttcggcaagaccatcacctaccgcgaggcggatcagctggtc
gagcacttcgctgcttacctgcttggcgagttgcagttgaagaaaggcgaccgcgtcgcc
ctgatgatgcccaactgcctgcaataccccatcgcgacattcggcgtgctgcgtgccggc
ctgaccgtggtcaacgtcaatccgctgtacaccccccgcgaactcaagcatcagttgatc
gactccggcgccagcgcgctggtggtcatcgacaacttcggcaccaccgtgcagcaggtc
atcgccgacacgccggtcaggcaagtcatcaccaccggcctgggcgacatgctgggcttc
ccgaaggcggcgctgctcaacttcgtggtcaagtacgtcaagaagctggtgcccgattac
cgcatcaacggcgcgattcgcttccgcgaggcgctggcgctgggccgcaagcaccgcgtg
ccgacgctgcagatcgaacccgacgacatcgccttcctgcagtacaccggcggcaccacc
ggcgtggccaagggcgccatgctgacccaccgcaatctggtcgccaacatgcagcaggcg
caccagtggctggcgggcaccggcaagctggaagaaggcaacgaagtggtgatcaccgcg
ctgccgccgtaccacatcttcgcattgactgcgaacggcctggtcttcatgaagatcggc
ggctgcaatcacctgatcagcaacccgcgcgacatgccaggtttcgtcaaggagctgaaa
aagacccgcttcaccgcgttcaccggcgtcaacacgctgttcaatgggctgctcaatacg
cccggattcgatcaggtggatttctcctcgctcaagatgacccttggcggcggcatggcc
gtccagcgctcggtcgccgagcgctggaagaaagtcaccggcctgaccttggtcgaagcc
tacggcctgaccgaaacctcgccggccgcatgcatcaacccgatggatctgaaggactac
aacggttcgatcggcgttccgattccgtcgaccgacgcctgcatcaaggatgacgccggc
aacgcgttgccgctgggcgagatcggcgagctgtgcatcaaggggccgcaggtgatgaag
ggcgactggaagaagcccgaggaaaccgccaaggtgatggacgccgagggctggctgcac
accggcgatatcgcgcgcatggacgaacaaggtttcgtgtatatcgtcgatcgcaagaag
gacatgatcctggtgtcgggcttcaacgtgtatcccaacgagatcgaagacgtgatcgcc
gcgctgccgggcgtgctggaagtggcggcggtgggcgtaccggacgaaaagtcgggcgaa
atcgtcaaggtggtcatcgtcaagaaggatccggcgttgacggccgaggacgtgaaagcg
cacgcgcgcgccaacctgaccgcctacaagcagcctcgggtgatcgaattccgcaaggag
ttgccgaaaaccaacgtcggcaagatcctgcgtcgcgaactgcgagattccgcacgccca
taa
DBGET
integrated database retrieval system
