Xanthomonas citri pv. citri 306: XAC2013
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Entry
XAC2013 CDS
T00084
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
xac
Xanthomonas citri pv. citri 306
Pathway
xac00071
Fatty acid degradation
xac00362
Benzoate degradation
xac00650
Butanoate metabolism
xac01100
Metabolic pathways
xac01120
Microbial metabolism in diverse environments
xac01200
Carbon metabolism
xac01212
Fatty acid metabolism
Module
xac_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XAC2013 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XAC2013 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XAC2013 (fadB)
Enzymes [BR:
xac01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XAC2013 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
ApbA
NAD_binding_8
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AAM36875
UniProt:
A0AAI7ZFB9
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All DBs
Position
complement(2355218..2357578)
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AA seq
786 aa
AA seq
DB search
MLVRRAAVLGAGVMGAQIAAHLTNAGVDTVLFDLPAKEGPADGIVLKAIANLGKLSPAPL
ASKALAEAITPANYESGLEQLRDCDLIIEAIAERMDWKQDLYKKIAPFVSEHAVLASNTS
GLGINKLSDVLPEQLRHRFCGVHFFNPPRYMHLAELIPAKGTDKAVLEGLEAFLVTTLGK
GVVYAKDTPNFIGNRIGVFSILSTIHHTQEFGLGFDEVDALTGPLVGRPKSATYRTSDVV
GLDTMAHVIKTMGDTLPDDPWHQYFKSPKWLEALIAKGALGQKVGAGIFRKVGKDIVVLD
LHEQDYRAADRSAAPEVVEILKIKNPAEKFAKLRESQHPQAQFLWASFRDLFHYSAFHLA
DIAETARDVDLAIRWGYGWSLGPFETWQAAGWKQVAQWIAEDISNGKSMSSAPLPNWVFD
GRDGVHGAEGSYSPARDAKLPRSSLPVYKRQRFPDPLLGEQFSPGETVFENDGVRMWHDG
DDIAVVSFKTKMNTVSDHVLNGLQDVVGRAEKDFAGLVIWQQKEPFSAGADLAGALGLLQ
AGKVDAFEALVANFQATSQRIKYAQVPVISAVRGLALGGGCEFQMHSAKTVASLESYIGL
VEAGVGLLPAGGGLKEIAVRASIAAGPGGDVFAELKKTFETVAMAKVSNSAVNAKELGLL
RATDKVVFNSYESLHIAKAEARALAEGGYRAPLPARHIQVAGDVGIATFKMLLVNMLEGR
FISEYDYEIASRIATVVCGGEVDRGALVDEEWLLKLERKHFVELAQQEKTQARIGHMLKT
GKPLRN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
ttgctagtccgtcgtgccgccgtgctcggtgccggcgtcatgggcgcgcagatcgccgcc
cacctcaccaatgccggtgtcgacaccgtgttgttcgacctgcctgccaaggaaggcccg
gccgacggcatcgtactcaaggcgatcgccaatctcggcaagctgagcccagccccgctc
gccagcaaggcgctggccgaggcgatcacgccagccaactacgagagcggtctggagcaa
ctgcgcgactgcgatctgatcatcgaagcgatcgccgaacgcatggactggaagcaggac
ctgtacaagaagatcgccccgttcgtctctgagcatgcagtgctggcatccaatacctcc
ggcctgggcatcaacaagctgtcggatgtgctgcccgagcagctgcgccatcgtttttgc
ggcgtgcacttcttcaacccgccgcgctacatgcacctggccgagttgattccggccaag
ggcaccgacaaggccgtgctcgagggcctggaagccttcctggtcaccacgctcggcaag
ggcgtggtgtatgccaaggacacgccgaacttcatcggcaaccgcatcggcgtgttctcg
atcctgtccaccatccatcacacgcaggaattcggcctgggcttcgacgaagtcgatgcg
ctgaccggcccgctggtcggccgtcccaagtcggccacctaccgcacctccgatgtggtc
ggcctggacaccatggcgcacgtcatcaagaccatgggcgacaccttgccggacgacccg
tggcatcagtatttcaagtcgccgaagtggctggaggcgctgatcgccaagggcgcgctg
ggccagaaggtcggggccggcatcttccgcaaggtcggcaaggacatcgtggtgctggac
ctgcacgagcaggactaccgcgccgccgatcgcagtgccgcgccggaagtggtcgagatc
ctaaagatcaagaatccggccgagaagttcgccaagctgcgcgagagccagcatccgcag
gcgcagttcctgtgggcgagcttccgcgacctgttccactacagcgccttccatctggcc
gatatcgccgagaccgcacgcgatgtggatctggcgattcgctggggctacggttggtcg
ctgggcccgttcgagacctggcaggcagccggctggaagcaggtggcgcagtggatcgcc
gaagacatctccaacggcaagagcatgagcagcgcaccgttacctaactgggtgttcgac
ggtcgcgatggcgtgcatggcgccgaaggctcgtatagcccggcgcgcgacgccaagctg
ccgcgctcgtcgctgccggtgtacaaacgccagcgcttccccgatccgttgcttggcgag
cagttctcgccgggcgaaaccgtgttcgaaaacgacggcgtgcgcatgtggcacgacggc
gacgacatcgcggtggtcagcttcaagaccaagatgaacaccgtttccgaccacgtgctc
aacggcttgcaggacgtcgttggccgcgccgagaaggacttcgctggcctggtgatctgg
cagcagaaggagcccttctccgccggcgccgatctggccggcgcgctcggcctgctgcag
gctggcaaggtcgatgccttcgaagcattggtcgccaatttccaggccaccagccagcgc
atcaagtacgcgcaggtgccggtgatctcggccgtgcgcggcttggcactgggcggcggt
tgcgagttccagatgcacagcgccaagacggtggcctcgctggagagctacatcggcttg
gtcgaagctggcgtcggcctgctgccggccggcggcggcctgaaggaaatcgcggtacgt
gcatcgatcgccgcaggcccgggcggcgacgtgtttgccgagctcaaaaagaccttcgaa
accgtggcaatggccaaggtctccaactcggcggtcaatgccaaggaactgggcctgctg
cgcgccaccgacaaagtggtgttcaacagctacgagagcctgcacatcgccaaggccgaa
gcgcgcgcactggccgagggcggctaccgcgccccgctgccggcacgccatatccaggtt
gccggcgacgtcggcatcgccaccttcaagatgctgctggtcaacatgctggaaggtcgc
ttcatcagcgaatacgactatgaaatcgccagccgcatcgccacggtggtgtgcggtggc
gaagtcgatcgcggcgcgctggtcgatgaagaatggctgctcaagctggagcgcaagcac
ttcgtcgaactggcccagcaggaaaagacccaggcccggattgggcacatgttgaagacg
ggcaagccgttgaggaactga
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