KEGG   Xanthomonas citri pv. citri 306: XAC2450
Entry
XAC2450           CDS       T00084                                 
Symbol
lhr1
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xac  Xanthomonas citri pv. citri 306
Brite
KEGG Orthology (KO) [BR:xac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xac03400]
    XAC2450 (lhr1)
Enzymes [BR:xac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     XAC2450 (lhr1)
    5.6.2.6  RNA 3'-5' helicase
     XAC2450 (lhr1)
DNA repair and recombination proteins [BR:xac03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    XAC2450 (lhr1)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 HTH_9 PhoH Extensin-like_C DUF5805 AAA_25
Other DBs
NCBI-ProteinID: AAM37301
UniProt: A0AAI8ES56
LinkDB
Position
complement(2851477..2855919)
AA seq 1480 aa
MMSPCRHDEQWCRALPMHPVLQHFHPVVAAWFAQTFAAPTPAQIAAWPAIQAGRHTLVAA
PTGSGKTLTAFFAAIDALIRDGLANGGALPDETRVVYVSPLKALSNDIHLNLDAPLQGIR
AALVAGGLPDVPIRTAVRTGDTPQRERAQARRTPPHILVTTPESLYVLLGSASGRTSLRQ
VRTVIVDEIHAVASDKRGSHLSLTLERLQRLVAQPITRVGLSATQKPIETVAQFLVGVDA
DGVPPPCEIVDIGYTRRRDLALALPPTPLSVVMSNDQWLQVYADVAALAQQHRTTLVFVN
TRRMAERAARHLGDLLGKQRVSAHHGSLSRETRLLAEQRLKAGDLTVLVATASLELGLDI
GDVDLVCQLGSPRSIATFLQRAGRSGHKVGGTPKARLFPQTRDELVECAALLDSIRRGEL
DALRIVPAPLDVLAQQIVAEAACEDWDEDALFALVRRAWPFAGLSRATFDSVVRMLCDGF
STRLGPRAGYLHRDAVHRRLHARRGARMTALTSGGTIPETGDYSVVLEPQAEKIGTVNED
FAVESLTGDVFQLGNASYRILRVEAGRVRVEDAKGAPPNIPFWLGEAPGRSDELSAAVSR
LRGEIAARLDTAPHQAARDWLQRELEMSAEAARQLVDYLANACTGLGAMPTQQCLVMERF
FDASGGTQLVIHSPYGSRINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSTSHSFAL
EEVGRYLHSSSAEHVLIQALLDAPLFGVRWRWNATNAMALPRFSGGNKVAPQLQRMKSED
LLATVFPDQVACAENLVGEREVPDHPLVAQTLEDCLHHAMDSEGWLQVLRGLESGAVTLV
ARDLAAPSPLAAEALNARPYAFLDDAPLEERRTQAVQSRRYTPQTSDDLGQLDPQAIAAV
CEEAWPQPRDAEEMHEALVGLGVLPVAEATDAQWQAWLAALAAAGRASCIAMHGIPALWI
SAERIDWFLPLYRQATAQPPLQAPADCRVADWQRDWAVRELLRGRLSAVGPAQVPALSNA
LQVPEPEIVLALAALQREGYVMAGRFSAHVQAEEWCERHLLARIHRYTLGRLRREIEPVS
QRDYARFLFEWQHVDSSSRVAGPDALAGVVGQLEGFEAPAVLWESELLPARIRDYQPAWL
DELCTAGRTLWARLRPGSGRGGGALRSTPIVLLPRREAQRWSALARDADDAPLGSRAQRV
MQVLQQQGALFFDEIADAAHLMNTELEDALSELVMRGRAHCDSYAGLRALLVPASKRPSA
LSRQRRRASALGIRDAGRWAPARALPDLPLAEAAQRHQDTLEHLARTLLRRYGVVCWRLL
EREAAWLPPWRELLRMYQRLEARGEIRGGRFIAGLSGEQFALPDAIAALRRVRAQPLPQQ
WICVSASDPSNLLGSLLPGERVARVPGNRVVSLDGLPMAVWAADRFQALQELTPEQAEQA
LRLLQRGPGAAEQSPMERLLAQSPASTVPFPVTRGSGRDK
NT seq 4443 nt   +upstreamnt  +downstreamnt
atgatgagcccttgccgtcatgatgagcaatggtgtcgggcattgccaatgcatcctgtc
ctgcaacacttccatcctgtggtcgctgcatggttcgcgcagaccttcgctgcgccgaca
ccggcgcagatcgctgcgtggccggcgatccaggccggacgccacacgctggtggccgcg
cccaccggctcgggcaagacgctaacggcgttcttcgccgccatcgatgcgttgatccgc
gacgggctggccaatggcggtgcgttgcccgacgaaacccgtgtggtctacgtctcgccg
ttaaaggccttgtccaatgacatccacctcaacctggacgcgcccttgcagggcatccgt
gcggcgctggtcgccggcggcttgccggatgtgccgattcgtaccgcggtgcgtaccggc
gacaccccgcagcgcgagcgcgcgcaggcgcgtcgcacgccgccgcatattctggtgacc
accccggagtcgctgtacgtgctgttggggtcggcatccgggcgcacgtcgctgcggcag
gtgcgcaccgtgatcgtcgatgaaatccacgcggtggcgtcggacaagcgcggcagccac
ctgagcctgacgctggagcgcttgcagcggctggtcgcgcagccgatcacgcgggtgggg
ctgtcggcgacgcagaagcccatcgaaacggtggcgcaattcctggtcggtgtcgacgca
gacggcgtgccgccgccgtgcgagatcgtcgatatcggctacacccgcaggcgtgatctg
gccctggcgttgccgcccacgccgctgagcgtggtgatgtccaacgaccagtggctgcag
gtgtatgccgatgtggccgcactggcgcagcaacatcgcaccacgctggtgttcgtcaac
acgcggcgcatggccgaacgcgcggcgcggcatctgggcgatctgctcggcaaacagcgc
gtgtcggcgcatcacggcagcctgtcgcgcgagacgcgcctgctggccgagcaacggctc
aaggccggcgatctcaccgtgttggtggcgaccgcttcgctggaactggggctggatatc
ggcgatgtcgatctggtctgccagctcggttcgccgcgctcgatcgccaccttcctgcaa
cgtgccgggcgttccggacacaaggtcggcggtacgcccaaggcgcgcctgtttccgcag
acccgcgacgaactggtcgaatgcgccgcgctgctggacagcatccgccgcggcgaactg
gatgccttgcgcattgtgccggcgccgctggacgtgctggcgcagcagatcgttgccgaa
gccgcatgcgaagactgggacgaagatgcgctgttcgcgctggtgcggcgcgcgtggccg
ttcgccgggttgagccgtgccaccttcgacagcgtggtgcgcatgttgtgcgatggcttc
agcactcggctcggtccgcgcgccggatatctgcatcgcgatgcggtgcatcggcgcttg
cacgcacggcgcggtgcgcgcatgacggcgctcacctccggcggcaccattcccgaaacc
ggcgactacagcgtggtgctggaaccgcaggccgaaaagatcggcacggtgaacgaggat
ttcgccgtcgaaagccttaccggcgatgtgttccagctcggcaatgcgagttaccgcatc
ctgcgcgtggaggccgggcgcgtgcgcgtggaagatgccaagggcgcgccgccgaacatt
ccgttctggctgggcgaagcgccgggtcgtagcgatgagctgtctgcggcggtgtcgcgc
ctgcgtggcgagattgccgcgcggctggacaccgcgccgcaccaggcggctcgcgactgg
ctgcagcgcgagctggagatgtccgccgaagcggcgcgacaactggtggattatctggca
aacgcttgcaccggattgggcgcgatgccgacccagcagtgcctggtcatggagcgcttc
ttcgatgccagcggcggtacccagctggtcatccattcgccgtacggcagccgcatcaat
cgtgcgtgggggctggcgctgcgcaagcgcttctgccgcaccttcaatttcgaattgcag
gctgcagccaccgaagatgcgattgtgctgtcgctgtcgaccagtcatagctttgcgctg
gaagaagttggccgttacctgcattcgtcgtcggccgagcatgtgctgatccaggcattg
ctggatgcgccgctgttcggcgtgcgctggcgctggaacgccaccaacgccatggcgctg
ccgcgcttcagtggcggcaacaaggtggcgccgcagttgcaacgaatgaagtccgaagat
ttgctcgccacggtattcccggaccaggtggcctgtgcggaaaatctggtcggcgaacgc
gaggtgcccgaccacccgttggtggcacagaccctggaagattgcctgcaccacgccatg
gatagcgaaggctggctgcaggtgttgcgcggcctggaatcgggcgcggtgacgctggtc
gcgcgcgacctggcggcgccgtcgccgctggccgccgaagccttgaacgcgcgtccctat
gcatttctcgacgatgcgcccctggaagaacgccgtactcaggccgtgcaaagtcggcgc
tatacgccgcagaccagcgacgacctgggacagctcgatccgcaagcgattgccgcagtg
tgcgaagaagcctggccacagccgcgcgatgccgaagaaatgcacgaggcactggtgggg
ctgggcgtgttgccggtcgcagaggccaccgatgcgcagtggcaggcatggttggccgcg
ctggccgcagctggtcgtgccagctgcattgccatgcatggcatcccggcgctgtggatc
agcgccgagcgcatcgactggttcttgccgttgtatcggcaagcaactgcgcagccgccg
ctgcaggcgccggccgattgccgcgttgccgactggcagcgcgactgggcggtgcgcgaa
ctgctgcgcgggcgcttgtccgccgttggcccggcacaggtgccggccttgtccaatgcg
ttgcaggtgcccgagccagagatcgtgctggcgttggcggccttgcaacgcgagggctac
gtcatggccgggcggttcagtgcgcacgtgcaggccgaagagtggtgcgagcgccatctg
ttggcacgcatccaccgctacacgttggggcgtctgcgccgcgagatcgaaccggtatcg
cagcgcgattacgcgcgttttctgttcgagtggcagcacgtggacagcagcagccgggtg
gctgggccggatgcgctggccggcgtggtggggcagctcgaaggcttcgaggcgcctgcg
gtgctgtgggagagcgagctattgccggcgcgcatccgcgactatcaaccggcctggctg
gacgagttgtgcaccgccgggcgcacgctgtgggcacgcttgcggcccggcagcggccgc
ggcggcggcgcactgcgcagcacgccgatcgtgctgctgccacggcgcgaagcgcagcgt
tggagcgcattggcgcgcgatgccgacgacgcgccattgggctcccgcgcgcaacgcgtc
atgcaggtgctgcagcagcaaggcgcgctgttcttcgatgaaatcgccgacgcggcgcat
ctgatgaacaccgagctggaagatgcattaagcgagctggtgatgcgcggccgcgcgcat
tgcgacagctatgccggtctgcgcgcgctgctggtgccggcgtccaagcggccgtcggca
ctgtcgcggcagcgtcgccgcgccagcgcgctgggcatccgcgatgcgggtcgctgggcg
ccggcgcgggcgctgcccgacttgccgcttgccgaagccgcgcagcgccatcaggacacg
ctcgaacacctcgcgcgcacgctgttgcggcgctacggcgtggtgtgctggcggctgctc
gaacgcgaggccgcatggctgccgccgtggcgggaattgctgcgcatgtatcaacggctg
gaagcgcgcggcgaaatccgcggcgggcggttcatcgccgggctgtccggcgagcagttt
gcgttgccggacgcgattgcggccttgcgccgtgtgcgcgcgcagccattgccgcagcag
tggatctgcgtcagtgccagcgacccaagcaatctgctcggcagtctgctgccgggcgag
cgggtcgcgcgcgtgccgggcaatcgtgtcgtttcgctggatgggctgcccatggcggtc
tgggcggcagaccgcttccaggccttgcaggagcttacgcccgagcaagccgagcaggcg
ctgcgtctgctgcagcgcggaccgggcgcggcagaacaatcgccgatggagcgcttgttg
gctcaatcgccggcaagcaccgtgccttttccggtcacgcgcggaagcggacgcgataaa
tag

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