Xanthomonas citri pv. citri 306: XAC2683
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Entry
XAC2683 CDS
T00084
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xac
Xanthomonas citri pv. citri 306
Pathway
xac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XAC2683 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xac03019
]
XAC2683 (pnp)
03016 Transfer RNA biogenesis [BR:
xac03016
]
XAC2683 (pnp)
Enzymes [BR:
xac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
XAC2683 (pnp)
Messenger RNA biogenesis [BR:
xac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
XAC2683 (pnp)
Transfer RNA biogenesis [BR:
xac03016
]
Prokaryotic type
tRNA degradation factors
XAC2683 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
S1_2
KH_PNO1_2nd
DUF7680
Motif
Other DBs
NCBI-ProteinID:
AAM37530
UniProt:
Q8PJ59
LinkDB
All DBs
Position
complement(3140958..3143072)
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AA seq
704 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKVDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFKGPIGAAKVGYKNGEYILNPTVTELKDSQLELVVAG
TANAVLMVESEAELLSEEVMLGAVTFGHREMQKVINVINELTVEAGTKPSDWVAPAKNDG
MIAALKEAVGDQLASAFQVRDKLQRRDAISAIKKDVLGALAPRATIEGWAAGDLAKEFGE
LEYQTMRGSVLSTKVRIDGRALDTVRPISATAGVLPRTHGSALFTRGETQAIVITTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPTLE
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGNDFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALQQAKAGRLHILGEMAH
ALTTPRQELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIIIAS
VNAIAAQAAKSRIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVGDKLKEGDLVRVKVLEVDKQGRIRLSIKAVEEGEGVQASAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcactcttgagacgggc
gaaatcgctcgccaggcaggcggcgccgtgatcgtcaaggtcgacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaagggcaggacttctttcctctgacggtc
gattatcaggagaagttctacgctggcggccgcatcccgggcggcttcttcaagcgcgaa
ggacgcgcgaccgagaaggaaacgttgatctcgcgcctgatcgatcgtccgatccgtccg
ctgttcccggaggactacaagaacgaagtgcagatcatcgccaccgtgatgtcgatgaac
ccggacatcgacggcgatatcgccgcgctgatcggcgcctcggctgcactgtcgctggca
ggcactcccttcaagggcccgatcggcgccgccaaggtcggctacaagaacggcgaatac
atcctcaacccgaccgtgaccgagctgaaggattcgcagctggagttggtcgtggccggt
accgccaacgcggtgctgatggtcgagtccgaagccgagttgctgtccgaagaagtcatg
ctgggcgcagtgacgttcggccatcgcgagatgcagaaggtcatcaacgtcatcaacgag
ctgaccgtcgaggccggcaccaagccgtccgactgggtggccccggcgaagaacgacggc
atgatcgctgccctgaaggaagcggtgggcgaccagctggcgtcggcgttccaggtgcgc
gacaagctgcagcgccgcgatgcgatttccgcgatcaagaaggacgtgctgggcgcactg
gcgccgcgcgccaccatcgaaggctgggctgccggtgatctggccaaggaattcggcgag
ctggaataccagaccatgcgtggttcggtgttgagcaccaaggtgcgtatcgacggtcgt
gcactggataccgtgcgtccgatcagcgccacggccggtgtgttgccgcgtacccatggc
tcggcgctgtttacccgcggcgagacgcaggcgatcgtgatcaccacgctgggcaccgcg
cgcgacggtcaggtcatcgacgcggtgtcgggcgagtacaaggaaaatttcctgttccat
tacaacttccctccgtactcggtgggcgagtgcggtcgtttcggtgcgccgaagcgtcgc
gaaatcggccacggccgcctggccaagcgcggcgtgctggcagtgatgccgaccctggaa
gaattcccgtacaccatccgcgtggtctcggaaatcaccgaatccaacggttcgtcctcg
atggcatcggtctgcggcagctcgctggcgctgatggatgctggcgtgccgatcaaggcg
ccggtcgcgggtatcgcaatgggcctggtcaaggaaggcaacgacttcgtcgtgctctcc
gacatcctgggtgacgaagatcacctcggcgacatggacttcaaggtggccggtactgcc
gaaggcgtgtccgccctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggcattgcagcaggccaaggctggccgtctgcacatcctgggcgagatggcgcat
gcgctgaccaccccgcgtcaggagctgagcgactacgcgccgcgcctgctcaccatcaag
atccacccggacaagatccgcgaagtgatcggcaagggtggctcgaccatccaggccatc
accaaggaaaccggcacgcagatcgacatccaggacgatggcacgatcatcatcgcctcg
gtcaatgccatcgctgcgcaggctgcgaagtcgcgcatcgaacagatcacctcggacgtg
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtc
accatcctgccgggcaaggacggcctggtgcacgtctcgcagatttccagcgagcgcgtg
gagaaggtcggcgacaagttgaaggaaggcgatctggtccgcgtcaaggtgctggaagtg
gacaagcagggccgcatccgcctgtcgatcaaggcagtggaagaaggcgaaggcgtgcag
gcgtcggccgagtaa
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