Xanthomonas citri pv. citri 306: XAC4151
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Entry
XAC4151 CDS
T00084
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xac
Xanthomonas citri pv. citri 306
Pathway
xac03420
Nucleotide excision repair
xac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XAC4151 (uvrD)
03430 Mismatch repair
XAC4151 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xac03400
]
XAC4151 (uvrD)
Enzymes [BR:
xac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XAC4151 (uvrD)
DNA repair and recombination proteins [BR:
xac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XAC4151 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
XAC4151 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AAM38986
UniProt:
A0AAI7ZIY1
LinkDB
All DBs
Position
complement(4878411..4880603)
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AA seq
730 aa
AA seq
DB search
MPVDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIF
AVTFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDD
QLRLVKRVVQALELDESKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAY
QERCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLA
GESGNVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVI
AHNPDRIGKQLWTDSGNGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSN
AQSRALEEALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRG
IGDRTLDEVRRLARASALSLWEAAMLCTQQNTLAARARNALATFLSLIGQLHAETGEMEL
AERIDHVLMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVA
FLAYASLEAGAGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLE
EERRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLNEVRPKVQVSRT
ASLGAARGGPVHGIVETAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWL
VMAYANLTVV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtggatgtctctcatttgctcgatcatttaaaccccgcccagcgcgaggccgtt
tctgcgccgccggggcactacctcgtgctggccggcgccggctccggcaagacgcgcgtg
ctgatccatcgcatcgcctggctcaatgaagtccagggcgtgcccaaccacggcatcttc
gcggtgaccttcaccaacaaggccgccggcgaaatgcgtcaccgtaccgacctgcagctg
cgcaatggcagccgcgggatgtggatcggtacatttcacgggctggcacatcgcctgttg
cgtctgcattggcaggatgcgcggctgccggaaggcttccaggtcatggacagcgacgac
cagttgcggctcgtcaagcgcgtggtgcaggcgctggagctggacgagagcaagtatcct
cccaagcagatgagctggtggatcaacgagcagaaggatgagggccgccgtccgcagcat
atccagcccgagcccaacgacgattggaccgaggtgcgccggcaggtgtatgcggcctac
caggaacgctgcgaccgctccgggctgctggatttcgccgagttgctgctgcgcgcgcat
gagttgctgcgcgacacgccggcattgctggcgcattaccgcgcgcgcttccgcgagatt
ctggtggacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgctggcc
ggcgagtcgggcaatgtgttcgtggtcggcgacgacgaccaggccatctatggctggcgc
ggcgccaaggtcgaaaacgtccagcgctttctgaaggatttccccggtgcgcagaccgtg
cggctggagcagaactaccgttccagcgcgaatattctgggcgctgccaatgcggtgatt
gcgcacaacccggaccgtatcggcaaacagctgtggaccgattcaggcaatggcgacccg
atcgatctgtacgcggcctacaacgaagtggacgaagcgcgctatgtggtcgagcgtgca
cggcagtgggtgcgcgacggcggcagttatggcgaagtggcggtgctctaccgcagcaac
gcgcaatcgcgcgcgctggaagaagcgctgatttccgagcagttgccgtaccgcgtgtat
ggcggcatgcgtttcttcgaacgtgccgaaatcaaggacgcgttggcttacttgcgtctg
ctgaccaatcgcagcgacgacgctgcgttcgaacgcgcggtcaacacgcccacgcgcggc
attggcgatcggacgctggatgaggtgcgccggctggcacgtgccagtgcgctgtcgttg
tgggaagcggcgatgctgtgcacgcagcagaacacgctggccgcgcgcgcacgcaatgcc
ctggccaccttcctcagcctgatcggccagctgcatgccgaaaccggcgagatggaactg
gccgaacgcatcgaccatgtgctgatgcgctcgggcctgcgcgagcattgggccaaggaa
agccgcggcgggctggattcggaatcgcgtaccgagaacctggacgaactggtgtcggtc
gcctcgcgcttcacccgcccggacgatgaagacagccagggcatgaccgagctggtcgcc
ttcctggcttacgcctcgctggaggccggcgcaggccaggcgcaggctggcgaagaaggc
gtgcagctgatgacgctgcattcggccaagggcctggaatttccgattgtgttcctggtc
ggcctggaagacggcctgtttccgagtgcgcgctcgctggaagagagcgggcggctggaa
gaagagcgtcgcctggcgtacgtgggcatcacccgcgcgcggcagaagctggtgctgtgc
tacgccgaatcgcgccgtatccacggccaggacaattacaacgtgccctcgcgcttcctg
cgtgagattccgcgcgacctgctcaacgaagtgcgcccgaaggtgcaggtttcgcgcacc
gcatcgctgggcgcggcgcgcggcggcccggtgcatggcatcgtggaaacggcaccgatc
aagctcggcgccaacgtcgaacaccccaagttcggcggcggcgtggtcgtcgattacgaa
ggcgctggcgcgcatgcgcgcgtgcaggtgcagttcgacgaggtcggcgccaagtggctg
gtgatggcctacgccaatctgactgttgtctag
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