Xanthomonas sp. CFBP 8443: NUG20_00940
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Entry
NUG20_00940 CDS
T11514
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NUG20_00940 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xaf03400
]
NUG20_00940 (xth)
Enzymes [BR:
xaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NUG20_00940 (xth)
DNA repair and recombination proteins [BR:
xaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NUG20_00940 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UYC20908
LinkDB
All DBs
Position
241171..241953
Genome browser
AA seq
260 aa
AA seq
DB search
MKIASWNVNSLNVRLPHLQQWLAAFAPDIVGIQETKLEDHKFPDAALAEAGYRSVFAGQK
TYNGVAILSRTPASDVQIGVPGLEDEQKRVIAATVGDLRIVNLYVVNGQDVGTDKYAYKL
RWLEAVHDWLAAELQRHPRMVVLGDFNIAPDPRDVHDPLVWSDNHILTSTAERGALHKLQ
ALGLHDGFRLHHADGGIFSWWDYRQAGFRRDLGLRIDLTLVSDALKASTRAAGIDREPRT
WDRPSDHAPAWIELEQGVGA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcctcctggaacgtcaactcgctcaacgtgcgcctgccgcacctgcaacag
tggctggcggcgttcgcgccggacatcgtcggcatccaggaaaccaagctggaagaccac
aagttcccggatgcggcgctggccgaggcgggctatcgcagcgtgttcgccgggcagaag
acctacaacggcgtggcgatcctgtcgcgcacgccggccagcgacgtgcagatcggcgtg
cccggtctggaggacgagcagaagcgggtcatcgccgccaccgtcggcgacctgcgcatc
gtcaacctgtacgtggtcaacggccaggacgtgggcaccgacaagtacgcctacaagctg
cgctggctcgaggcggtgcacgactggctcgccgccgagctgcagcgccatccgcgcatg
gtggtgctgggcgacttcaacatcgcgccggacccgcgcgacgtgcacgacccgctggtg
tggagcgacaaccacatcctcacctccaccgccgagcgcggcgcgctgcacaagctgcag
gcgctgggcctgcacgacggcttccgcctgcaccacgccgacggcggcatcttcagctgg
tgggactaccgccaggccggcttccgccgcgacctcggcctgcgcatcgacctgaccctg
gtctccgacgcgctgaaggcgagcacgcgcgcggccggcatcgaccgcgaaccgcgcacc
tgggaccgccccagcgaccatgcgccggcctggatcgaactggagcaaggagtcggcgca
tga
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