Xanthomonas sp. CFBP 8443: NUG20_01060
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Entry
NUG20_01060 CDS
T11514
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf03420
Nucleotide excision repair
xaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NUG20_01060 (uvrD)
03430 Mismatch repair
NUG20_01060 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xaf03400
]
NUG20_01060 (uvrD)
Enzymes [BR:
xaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NUG20_01060 (uvrD)
DNA repair and recombination proteins [BR:
xaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NUG20_01060 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NUG20_01060 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
InPase
Motif
Other DBs
NCBI-ProteinID:
UYC20930
LinkDB
All DBs
Position
265649..267850
Genome browser
AA seq
733 aa
AA seq
DB search
MDVSHLLDDLNPAQREAVSAPSGHYLVLAGAGSGKTRVLTHRIAWLNEVHGVPVHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDAKLPESFQVLDSDDQL
RLVKRVVQQLELDEGKFPPKQIVWWINQQKDEGRRAQHIQPEPRDEWTTTLRSAYALYQE
RCDRAGLVDFAELLLRAHELLRDNPALLAHYRSRFGEILVDEFQDTNAIQYAFVRVLAGD
SGRVFVVGDDDQAIYGWRGAKVENVQRFLKDFPNAQTIRLEQNYRSSANILNAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEIDEARYVVERVRQWVRDGGSYSEAAVLYRSNAQ
SRAFEESLIAEQVPYRVYGGMRFFERAEIKDTLAYLRLVANRADDAAFERAVNTPTRGIG
DRTLDEVRRLARAQSLSLWAAAQQAAQQGGDLAARARNALAQFLGLIEQLSAEVAGLPLP
EQIDQVLARSALRDHWSKESRGGLDSESRTDNLDELVSVASRFVRADGDEDADEGRQAMT
ELVAFLAYASLEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGMEDGLFPSARSLEES
GRLEEERRLAYVGITRARHKLVLSYAESRRIHGQDNYNVPSRFLREIPRELLHEVRPKVQ
VSRSASLGAQRNLGHSVIEAPAIKLGANVQHPKFGGGVVVDYEGSGAHARVQVQFDEVGA
KWLVMAYANLTVI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctcccatttgctcgatgatctgaaccccgcccagcgcgaggccgtctccgca
ccgtccggccattacctggtcctggccggcgccgggtccggcaagacgcgcgtgctcacc
caccgcatcgcctggctcaacgaagtccacggcgtgccggtgcacggcatcttcgcggtc
accttcaccaacaaggcggccggcgagatgcgccaccgcaccgacctgcagctgcgcaac
ggcagccgcggcatgtggatcggcaccttccacggcctggcgcaccgcctgctgcggctg
cactggcaggacgcgaagttgccggaaagcttccaggtgctcgactccgacgaccagctg
cggctggtcaagcgcgtcgtgcagcagctggagctggacgagggcaagttcccgcccaag
cagatcgtgtggtggatcaaccagcagaaggacgagggccggcgcgcacagcacatccag
cccgagccgcgcgacgagtggaccaccaccctgcgcagcgcctacgcgctgtaccaggag
cgctgcgaccgggcgggcctggtcgatttcgccgagctgctgctgcgcgcgcacgaactg
ctgcgcgacaacccggcgctgctggcgcactaccgcagccgcttcggcgagatcctggtc
gacgagttccaggacaccaacgccatccagtacgcgttcgtgcgcgtgctcgccggcgac
agcgggcgcgtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggcgcc
aaggtcgagaacgtgcagcgcttcctgaaggatttcccgaacgcgcagaccatccgcctg
gagcagaactaccgttccagcgccaacatcctcaacgccgccaacgcggtgatcgcgcac
aacccggaccgcatcggcaagcagctgtggaccgattcgggcgacggcgacccgatcgac
ctgtacgcggcctacaacgagatcgacgaggcgcgctacgtggtcgagcgcgtgcgccag
tgggtgcgcgacggcggcagctacagcgaggcggcggtgctctaccgcagcaacgcgcag
tcgcgcgcgttcgaagaatcgctgatcgccgaacaggtgccgtaccgcgtctacggcggc
atgcgcttcttcgagcgcgccgaaatcaaggacaccctggcctacctgcggctggtcgcc
aaccgcgccgacgacgcggcgttcgagcgcgcggtgaacacccccacccgcggcatcggc
gaccgcaccctggacgaagtgcggcgcctggcacgcgcgcagtcgctgtcgttgtgggcc
gccgcgcagcaggccgcgcaacagggcggcgacctcgccgcgcgggcgcgcaacgccctg
gcgcagttcctgggcctgatcgagcagctgtccgccgaggtggccgggctgccgctgccc
gagcagatcgatcaggtgctggcgcgctcggcgttgcgcgaccactggagcaaggaaagc
cgcggcgggctggattcggaatcgcgcaccgacaacctcgacgaactggtctcggtggcc
tcgcgcttcgtgcgcgccgacggcgacgaggacgccgacgaaggccgccaggcgatgacc
gagctggtcgcgttcctggcctacgcctcgctggaggccggcgaaggccaggcccaggcc
ggcgaggacggcgtgcagctgatgacgctgcattcggccaagggcctggaattcccgctg
gtgttcctggccggcatggaagacggcctgttccccagcgcgcgttcgctggaggagagc
gggcggctggaggaagagcggcgcctggcctacgtcggcatcacccgcgcccgccacaag
ctggtgctcagctatgccgagtcgcggcgcatccacggccaggacaactacaacgtgccc
tcgcgcttcctgcgcgagatcccgcgcgagctgctgcacgaagtgcggccgaaggtacag
gtgtcgcgcagcgcctcactcggcgcgcaacgcaacctcggccacagcgtcatcgaggcg
ccggcgatcaagctcggcgccaacgtgcagcaccccaagttcggcggcggcgtggtcgtc
gactacgagggcagcggcgcccacgcgcgcgtgcaggtgcagttcgacgaagtcggcgcg
aagtggctggtgatggcgtacgcgaatctgacggtgatctaa
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