Xanthomonas sp. CFBP 8443: NUG20_04440
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Entry
NUG20_04440 CDS
T11514
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf00260
Glycine, serine and threonine metabolism
xaf00460
Cyanoamino acid metabolism
xaf00630
Glyoxylate and dicarboxylate metabolism
xaf00670
One carbon pool by folate
xaf00680
Methane metabolism
xaf01100
Metabolic pathways
xaf01110
Biosynthesis of secondary metabolites
xaf01120
Microbial metabolism in diverse environments
xaf01200
Carbon metabolism
xaf01230
Biosynthesis of amino acids
xaf01240
Biosynthesis of cofactors
xaf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NUG20_04440
09102 Energy metabolism
00680 Methane metabolism
NUG20_04440
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NUG20_04440
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NUG20_04440
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NUG20_04440
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NUG20_04440
Enzymes [BR:
xaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NUG20_04440
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UYC21566
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Position
1067479..1068732
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AA seq
417 aa
AA seq
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MFPRDARIETYDPELAQAIAAEAGRQEDHVELIASENYCSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRVKQLFGADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNEQGLIDYDEVERLALEHKPKMVVAGFSAYSQK
IDWARFRAIADQVGAVLFVDMAHVAGLVAAGVYPSPMDHAHVVTSTTHKTLRGPRGGIIL
AKGASEELVKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKDYQQQVVKNAQAMAK
TLIARGYKIVSGGTENHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAITTRGYLEQDSIDLANWIADVLDAPADAAVIARVREAVTAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgcgacgcccgcatcgaaacctacgatcccgaactggcccaggccatcgcc
gccgaagccggccgccaggaagaccatgtcgagctgatcgccagcgagaactactgcagc
ccgcgggtgatggaagcccagggcagccaactgaccaacaagtacgccgagggctatccg
ggcaagcgctactacggcggctgcgaattcgtcgacatcgccgagcagttggcgatcgac
cgggtcaagcagctgttcggcgccgactacgccaacgtgcagccgcacagcggctcgcag
gccaaccaggcggtgtacttcgcgctgctgcagccgggcgacaccatcctgggcatgtcg
ctggcccacggcggccatctgacccacggcgccaaggtcaacgcctccggcaagctgttc
aacgcggtgcagtacggggtgaacgagcagggcctgatcgactacgacgaagtcgagcgg
ctggcgctggagcacaagccgaagatggtcgtcgccggcttctccgcgtattcgcagaag
atcgactgggcgcgcttccgcgccatcgccgaccaggtcggcgcggtgctgttcgtggac
atggcgcacgtggccggcctggtcgccgccggcgtgtatccgagcccgatggaccacgcg
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcctg
gccaagggcgcgagcgaggaactggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggcccgctgatgcacgtgatcgcggccaaggcggtggcgttcaaggaagcgctg
gagccggaattcaaggactaccagcagcaggtggtgaagaacgcgcaggcgatggccaag
accctgatcgcgcgcggctacaagatcgtctccggcggcaccgagaaccacctgatgctg
gtggacatgatcggcaaggacgtgtccggcaaggacgcggaagccgcgctgggcaaggcc
cacatcaccgtcaacaagaactcggtgcccaacgacccgcgctcgccgttcgtgacctcg
ggcctgcgcctgggcaccccggccatcaccacccgcggctacctggagcaggacagcatc
gacctggccaactggatcgccgacgtgctcgacgccccggccgatgccgcggtcatcgcc
cgcgtgcgcgaggcggtgaccgcgcagtgcaggaagtatccggtgtatggctga
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