KEGG   Xanthomonas sp. CFBP 8443: NUG20_04455
Entry
NUG20_04455       CDS       T11514                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xaf  Xanthomonas sp. CFBP 8443
Pathway
xaf00740  Riboflavin metabolism
xaf01100  Metabolic pathways
xaf01110  Biosynthesis of secondary metabolites
xaf01240  Biosynthesis of cofactors
xaf02024  Quorum sensing
Module
xaf_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xaf00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NUG20_04455 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NUG20_04455 (ribD)
Enzymes [BR:xaf01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NUG20_04455 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NUG20_04455 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam TetR_N
Other DBs
NCBI-ProteinID: UYC21568
LinkDB
Position
1069886..1071004
AA seq 372 aa
MSGSEMGGFSADDHRHMAQALRLAERGAYTTRPNPMVGCVLVRDGEVVGEGFHQRAGGPH
AEVFALRDAGARARGATAYVTLEPCAHFGRTPPCALALIEAGVTRVVAAMADPFPQVNGG
GFALLREAGIEVRSGLMDTQARALNRGFLSRVERGRPWLRVKLGASLDGRTALASGESKW
ITGAAARHDVQRWRARAGAILTGAGTVLADDPSLTVRLDDGTDVVPPLRVVLDAQLRTLQ
RAKVRDGAAPTLYLHAPGLAPPPLPGAEFAAVAMQSGRLDLAAALRLLAERGINEVQVEA
GATLGGSLLRAGLVDEVLLYLAPLLLGDAARPLLAGLGIDTMAQRVPLRLLETRQVGDDL
RLLLRPAAADAG
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgagcggcagcgagatgggcgggttttccgccgacgatcatcggcacatggcgcaggcg
ctgcgcctggccgagcgcggcgcctacaccacgcgccccaacccgatggtgggctgcgtg
ctggtgcgcgacggcgaggtggtcggcgagggcttccaccaacgtgccggcggcccgcac
gcggaggtgttcgcgctgcgcgacgccggcgcgcgtgcgcgcggcgccaccgcctacgtg
accctggagccgtgcgcgcatttcgggcgcacgccgccgtgcgcgctggcgttgatcgag
gccggggtgacccgcgtggtggcggcgatggccgacccgtttccgcaggtcaacggcggc
ggctttgcgctgctgcgcgaggccggcatcgaggtccgcagcgggctgatggacacgcag
gcgcgcgccttgaaccgcggcttcctgtcgcgggtggagcgcggccggccgtggctgcgg
gtcaagctcggcgccagcctggatgggcgcaccgcgctggccagcggcgaatccaagtgg
atcaccggcgcggccgcgcgccacgacgtgcagcgctggcgcgcgcgcgccggggcgatc
ctgaccggtgccggcaccgtgctggccgacgatccgtcgctgacggtgcgcctggatgac
ggtaccgatgtggtgccgccgctgcgcgtggtgctggatgcgcagctgcgcacgctgcag
cgggccaaggtgcgcgatggcgccgcgccgacgctgtacctgcacgcgccggggctggcg
ccgccgccgctgccgggcgccgagttcgccgcggtcgcgatgcagtccggtcgcctcgat
ctggccgcggcgctgcgcctgctcgccgagcgcggcatcaacgaagtccaggtcgaagcc
ggtgcgaccctgggcgggtcgctgctgcgcgccggcctggtcgacgaagtgctgctgtac
ctggcgccgctgctgctcggcgacgccgcgcgcccgctgctggccggcctgggcatcgac
acgatggcgcagcgcgtgccgctgcgcttgctggagacccgccaggtcggcgacgacctg
cgcctgctgctgcgtccggcggcggcggacgccgggtag

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