Xanthomonas sp. CFBP 8443: NUG20_06010
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Entry
NUG20_06010 CDS
T11514
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf03030
DNA replication
xaf03430
Mismatch repair
xaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NUG20_06010 (dnaX)
03430 Mismatch repair
NUG20_06010 (dnaX)
03440 Homologous recombination
NUG20_06010 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xaf03032
]
NUG20_06010 (dnaX)
03400 DNA repair and recombination proteins [BR:
xaf03400
]
NUG20_06010 (dnaX)
Enzymes [BR:
xaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NUG20_06010 (dnaX)
DNA replication proteins [BR:
xaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NUG20_06010 (dnaX)
DNA repair and recombination proteins [BR:
xaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NUG20_06010 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
ResIII
AAA_18
AAA_7
PIF1
AAA_assoc_2
DUF3646
Mg_chelatase
AAA_lid_RFC1
AAA_19
nSTAND3
TsaE
AAA_2
TniB
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UYC21846
LinkDB
All DBs
Position
1391885..1393741
Genome browser
AA seq
618 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALTNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
EQIQGQMTRILAAEQIEVDASAIVQLAKAADGSLRDGLSLLDQAIAYAGGALRDDVVRAM
LGTVDRTQVGAMLEALADGDGQGLLQVVAALAEFSPDWGGVLEALAEALHRIQVRQLVPA
AAVAGLDGLDPAPFAERLRPEIVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPA
GAAPLPAASGSGTATEGRTPAAPVAAAPAAASASVAAPAVAAPAAPMMAPAPTPAAARPT
PAPAPLATAAVLDPPWDTAAPAPAPAAPAATNTAPPTPVPVAEPEMAMVPPLASATRSPP
SASATPRVLHAAEDWLELVADCGLTGPSRQLAANAAFVSHAEGVLRLSLSAGFEYLQSER
SLGELATALADALGSRPKIVIESGIEVDAETLHERSHRQRGERQNAAETAFMRDPAVQAL
IQQQGARVVPDSIRPYEE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgttctcgcccgcaagtggcgccccaagcgttttgccgagctggtgggg
caggagcacgtggtccgcgcgctcaccaatgcgctggacagcgggcgcgtgcaccacgcg
ttcctgttcaccggcacccgcggcgtcggcaagaccaccatcgcgcggatcttcgccaag
tcgctgaactgcgagcagggcaccagcgccgatccgtgcgggcagtgcccggcgtgcctg
gacatcgatgccggccgctatatcgacctgctggagatcgacgccgcgtccaataccggc
gtggacgacgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgcggcaagttc
aaggtgtacctgatcgacgaggtgcacatgctgtccaaggcggcgttcaacgcgctgctg
aagacgctggaggagccgccggagcacgtcaagttcctgctcgccaccaccgacccgcag
aagctgccggtgacggtgctgtcgcgctgcctgcagttcaacctcaagcgcctggacgag
gagcagatccaggggcagatgaccaggatcctggccgccgagcagatcgaggtcgatgcc
tcggcgatcgtgcagctggccaaggccgccgacggcagcctgcgcgacggcctgtcgctg
ctcgaccaggccatcgcctacgccggcggcgcgctgcgcgacgacgtggtacgggcgatg
ctgggcacggtcgaccgcactcaggtcggggcgatgctcgaggcactggccgatggcgac
gggcaggggctgctgcaggtggtcgctgcgctggccgaattctcgccggactggggcggg
gtgctggaggcgctggccgaggcgctgcaccggatccaggtgcggcagctggtgccggcc
gcggcggtggcgggtctggacggtctcgatccggcgccgttcgccgagcggctgcgtccg
gaaatcgtgcagctgtggtaccagatggcgctgaacgggcgccgcgacctgtacctggcg
ccgagcccgcgcgccggattcgaaatggcggtgctgcgcatgctggcgttccgcccggcc
ggcgcggcgccgttgccggccgcatccgggtcgggtacggcgacggaaggccgtacgcct
gcggcgccggtggccgcggcaccggccgccgcttcggcaagcgtcgctgcgccggccgtc
gcggcgcccgctgcaccgatgatggcgcccgcgccgacacccgccgctgccaggccgacg
cctgcgcctgcgccgctcgcgacggccgcagtgctggacccgccgtgggataccgcggca
ccggcacctgcgccggccgcgccggcagcgaccaacaccgcgccgccgacgcctgtgcct
gtggccgagccggaaatggcgatggtgccgccgctggcctcggccacacgctcgccgccg
tctgcaagcgcgacgccgcgcgtgctgcacgcggccgaggactggctggagctggtcgcc
gattgcggcctgaccgggccgtcgcggcagctggcggccaacgcggccttcgtcagccat
gccgagggcgtgctgcggctgtcgctgtcggcgggcttcgaatacctgcagtccgaacgg
tcgctcggcgaactggccacggcgctggccgatgcgctgggcagcaggccgaagatcgtg
atcgaaagcggcatcgaagtcgatgccgagaccctgcacgagcgctcgcaccggcaacgc
ggcgagcgccagaatgcggccgagaccgcgttcatgcgcgacccggcggtgcaagcgctg
atccagcagcaaggcgcgcgggtcgttcccgattccatccgcccatacgaagagtag
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