Xanthomonas sp. CFBP 8443: NUG20_06130
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Entry
NUG20_06130 CDS
T11514
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf03030
DNA replication
xaf03430
Mismatch repair
xaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NUG20_06130
03430 Mismatch repair
NUG20_06130
03440 Homologous recombination
NUG20_06130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xaf03032
]
NUG20_06130
03400 DNA repair and recombination proteins [BR:
xaf03400
]
NUG20_06130
Enzymes [BR:
xaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NUG20_06130
DNA replication proteins [BR:
xaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NUG20_06130
DNA repair and recombination proteins [BR:
xaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NUG20_06130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_25
UBA
nSTAND3
AAA_22
UBA_7
TIP49
Motif
Other DBs
NCBI-ProteinID:
UYC21870
LinkDB
All DBs
Position
1415508..1416470
Genome browser
AA seq
320 aa
AA seq
DB search
MSELSFAPWQQRAYEQTVAALDAGRLGHGLLICGPDGLGKRAVALKLAAHVLGQGEPAAN
LRSAQLIAAGTHPDLQLISFIPNRTGDKLRTEIVIEQVREISQKLSLTPQYGIAQVVVVD
PADAINRAACNALLKTLEEPQPGRYLWLISAQPARLPATIRSRCQRLEFKLPPADEAIAW
LLAQEFPEKTAREALAAARGHPGLAAQWLREDGLKLRRQVATDLEQVAAGKLGTVEAAQR
WSGDGLAEQRLGHAADLALAQASQAGLTDPARLHKLATWFDAANRTRDLLRTTVRGDLAI
AELLLAWRDGDRPVRRGGQR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctgtccttcgcgccctggcagcagcgcgcctacgaacagaccgtggccgcg
ctcgacgccggccggctcggccatggcctgctgatctgcggcccggacggcctgggcaag
cgcgcggtggcgctgaagctggccgcgcacgtgctcggccagggcgaaccggccgcgaac
ctgcgcagcgcgcagctgatcgccgccggtacccatcccgacctgcagctgatctcgttc
attcccaaccgtaccggcgacaagctgcgcaccgagatcgtcatcgaacaggtgcgcgag
atctcgcagaagctgtcgctgaccccgcagtacggcatcgcccaggtggtggtggtggat
ccggccgacgcgatcaaccgcgccgcctgcaacgccctgctcaagaccctggaagagccg
cagcccggccgctacctgtggctgatcagcgcgcagccggcacggctgccggcgaccatc
cgcagccgctgccagcgcctggagttcaagctgccgccggccgacgaggcgatcgcctgg
ctgctggcccaggagttcccggaaaagaccgcgcgcgaggcgctggccgccgcgcgcggc
caccccggcctggccgcgcagtggctgcgcgaggacggcctgaagctgcgccggcaggtg
gccaccgacctggagcaggtcgccgccggcaagctgggcacggtcgaggcggcgcagcgc
tggagcggcgacggcctcgccgagcagcgcctgggccacgccgccgacctggcgctggcg
caggcctcgcaggctggcttgaccgacccggcgcgattgcacaagctggcgacctggttc
gacgcagccaaccgcacccgcgacctgctgcgcaccaccgtccgtggcgacctggccatc
gcggaactgttgttggcctggcgcgatggcgatcgcccggtccggagagggggacaacga
tga
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