Xanthomonas sp. CFBP 8443: NUG20_08950
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Entry
NUG20_08950 CDS
T11514
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xaf Xanthomonas sp. CFBP 8443
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xaf03009
]
NUG20_08950
Enzymes [BR:
xaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NUG20_08950
Ribosome biogenesis [BR:
xaf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NUG20_08950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SAMD1_SHD
Motif
Other DBs
NCBI-ProteinID:
UYC22393
LinkDB
All DBs
Position
complement(2098529..2100091)
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AA seq
520 aa
AA seq
DB search
MSDTSRKPSLNKLSLKRDAAEQPKLEERLHKVLAQAGLGSRRALEQRIADGLVKVNGEVA
QTGMSVKSGDKIELDGRSFVASALTEPARVLIYNKPEGEVTTREDPEGRPTIFEALPALK
GARWIAIGRLDINTTGLLLLTTDGEMANAMMHPSYEIEREYVVRVRAPEGEDKVPDSMVE
RLSRGVLLEDGGAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTR
YGKVALPRELLRGQSLELAQDKVEALRAELKLEEGTPSALTLQPVIGQRKAAKATVQVGR
GGNAYVNGHNVADEGRELRRFDNFREDRGRGRGGKKPHGGLTVSGEMAAQQAQKPFKQRN
PKGPKPLPDGNPAAFRTWYVPDGVSTGPTGHRNAGPGPGRGGQGQGQGRPYGKPRPAGAG
AGQGAGPGRGGQGQGQGQRKAHPYGHPGNAPSFPSDHANPGFSPYGAAPRSARPAGPRAD
GQKRGPGGPGGRPGGNRPGGGRPGGGGRPGGGNRGPRGGG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacctcccgcaagccgtcgttgaacaagctctcgctcaagcgcgatgccgcc
gagcagccgaaactggaagaacgcctgcacaaggtcctggcgcaggccggcctgggttcg
cgccgcgcgctggagcagcgcatcgccgacggcctggtcaaggtcaacggcgaggtcgcg
cagaccggcatgtcggtcaagagcggcgacaagatcgagctggacggccgcagcttcgtc
gccagcgcgctgaccgagccggcgcgcgtgctgatctacaacaagcccgaaggcgaagtg
accacccgcgaggatcccgaaggccgcccgaccatcttcgaggcgctgccggcactgaag
ggcgcgcgctggatcgcgatcggccgtctggacatcaacaccaccgggctgctgctgctg
accaccgatggcgagatggccaacgcgatgatgcatccgtcctacgagatcgagcgcgag
tacgtggtgcgcgtgcgcgccccggaaggcgaggacaaggtgcccgacagcatggtcgag
cgcctctcgcgcggcgtgctgctggaggacggcggcgccaagttcgacgagatcgaacgc
atcggcggcaccgattcgcacgactggttccgcgtcgtggtcaaggaaggccgcaaccgc
gaagtgcgccggctgtgggaatcgcagggctgccaggtcagccgcctcaagcgcacccgc
tacggcaaggtggcgctgccgcgcgaactgctgcgcgggcagtcgctggagctggcgcag
gacaaggtcgaggcgctgcgcgccgaactgaagctggaggaaggcacgccgtcggcgctg
accctgcagccggtgatcggccagcgcaaggcggccaaggccaccgtgcaggtcggccgc
ggcggcaacgcctacgtcaacggccacaacgtcgccgacgaaggccgcgagctgcgccgc
ttcgacaacttccgcgaggaccgcggccgcggccgcggcggcaagaagccgcacggcggg
ctcaccgtcagcggcgagatggccgcccagcaggcgcagaagccgttcaagcagcgcaac
ccgaagggtcccaagccgctgccggacggcaaccccgccgcgttccgcacctggtacgtg
cccgacggcgtcagcaccggcccgaccggccaccgcaatgccggtcccggcccgggccgt
ggcggccagggtcagggacagggccggccctatggcaagccgcgccccgccggcgccggt
gccggccagggcgcaggcccgggccgcggcggccagggtcagggacaaggccagcgcaag
gcgcacccgtacgggcatccgggcaatgcaccgagcttcccgtccgaccacgccaacccc
ggtttcagcccctacggcgccgccccgcgctcggcgcgaccggccggcccgcgcgccgac
ggacagaagcgcggcccgggcggccccggcggtcgtccgggcggcaaccgccccggcggc
gggcgtccgggtggcggcggccgccccggcggcggcaaccgcggtccgcgcggcggcggc
tga
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