Xanthomonas sp. CFBP 8443: NUG20_09125
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Entry
NUG20_09125 CDS
T11514
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf00541
Biosynthesis of various nucleotide sugars
xaf01100
Metabolic pathways
xaf01250
Biosynthesis of nucleotide sugars
Module
xaf_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NUG20_09125 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xaf01005
]
NUG20_09125 (kdsB)
Enzymes [BR:
xaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NUG20_09125 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
xaf01005
]
Lipid A
NUG20_09125 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2171
Motif
Other DBs
NCBI-ProteinID:
UYC22424
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Position
2140472..2141260
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AA seq
262 aa
AA seq
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MSAGRDLTPPPFVVAIPARYAASRLPGKPLRALGGEPLVRHVARRALGAGAQQVWVAADD
PRIAAAVADLEGVHVALTSAAHASGTDRLAECADIAGWDDATVVVNLQGDEPFAPAAGIV
AVAQALAASGAEMATLGTPVESAESLFDSNVVKLVRSARGDALYFSRAPIPWHRDAFAAS
RERLPPGPWLRHIGIYAYRAGFLRRFAAMPPGGLEQVEALEQLRVLEAGFRIAVALSPAP
FPPGVDTPEDLARAEAHLRSLA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggacgcgacctgaccccgccgccgttcgtggtcgccatcccggcgcgctac
gccgcctcgcgcctgccgggcaagccgctgcgcgcgctcggcggcgaaccgctggtccgg
cacgtggcgcgccgcgcgctcggcgccggcgcacagcaggtgtgggtggccgcggacgat
ccgcgcatcgccgcggcggtggccgacctggaaggggtgcacgttgcgctgacgtccgcg
gcgcacgcctccggcaccgatcgcctggccgaatgcgccgacatcgccggctgggacgac
gccaccgtggtggtcaacctgcagggcgacgagccgttcgcgccggccgcgggaatcgtc
gcggtggcgcaggcgctggccgccagcggcgcggagatggcgacgctgggcacgccggtc
gagtcggccgagagcctgttcgactcgaacgtggtcaagctggtgcgcagcgcgcgcggc
gatgcgctgtatttcagccgtgcgccgatcccgtggcaccgcgacgcgttcgccgcctcg
cgcgaacgcctgccgccgggtccgtggctgcgccacatcggcatctacgcctatcgtgcc
gggttcctgcgccggttcgcggcgatgccgccgggcgggctggaacaggtggaggcgctg
gagcagttgcgggtgctggaagccggtttccgcatcgcggtggcgctgtcgccggcgccg
ttcccgcccggggtcgacacgcccgaggacctggcccgcgccgaggcgcatctgcggagc
ctggcatga
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