Xanthomonas sp. CFBP 8443: NUG20_13200
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Entry
NUG20_13200 CDS
T11514
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NUG20_13200 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xaf03400
]
NUG20_13200 (uvrB)
DNA repair and recombination proteins [BR:
xaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NUG20_13200 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NUG20_13200 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UYC19143
LinkDB
All DBs
Position
complement(3164704..3166725)
Genome browser
AA seq
673 aa
AA seq
DB search
MSDRFQLVSPYSPAGDQPQAIEKLVAGFEAGLAKQTLLGVTGSGKTYTIANVVEAIQKPT
LVMAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLAATKTLLSRRDALVVATVSAIYGLGAPEDYLSLRLILSIGEHIEQRQLIKHLTDLQ
YTRNEYELHRGTFRVRGEVIDVFPAESDSEALRIELFDGDVENLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKIELKERLEQLYAQNKLVEAQRLAQRTQFDLEMMAEV
GYCNGIENYSRHLTGKAPGEPPPTLFDYLPADALLVVDESHVTVPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLID
PEVEIRPVGTQVDDLLSEIGLRVALGDRVLVTTLTKRMAENLTEYLGEHGVKVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADRMTRSMQAAIDETGRRREKQVEYNLEHGITPKSVARPIVDILEGA
RGDAAVEAKSGKGKGRRVAEEPADYRMLDPAEVASRLKALEQKMYQHARDLEFEDAARVR
DQIKKLRDASLVS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccgtttccaactcgtctcgccctactcgccggccggcgaccagccgcaggcg
atcgagaagctggtggccggcttcgaggccggcctggccaagcagaccctgctcggcgtg
accggttcgggcaagacctacaccatcgccaacgtggtcgaggcgatccagaagccgacc
ctggtgatggcgccgaacaagaccctggcggcgcagctgtacggcgagttcaaggccttc
ttcccgaacaacgcggtcgagtacttcgtcagctactacgactactaccagcccgaggcg
tacgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgagcacatcgag
cagatgcgcctggccgcgaccaagacgctgctgtcgcgccgcgatgcgctggtggtggcg
acggtctcggcgatctacggcctgggcgcgccggaggactacctgtcgctgcgcctgatc
ctgtcgatcggcgagcacatcgagcagcgccagctgatcaagcacttgaccgatctgcaa
tacacccgcaacgaatacgaactgcaccgcggcacgttccgcgtgcgcggcgaggtcatc
gacgtgtttcccgccgagtcggacagcgaggcgttgcgcatcgagctgttcgatggcgac
gtcgagaacctgaccctgttcgatccgctgaccggcgagaccctgcgcaagctgcagcgc
tacacggtctatccgaagacccattacgccaccacccgcgagcgcacgctcagcgccgtg
gatacgatcaagatcgagctgaaggagcggctggagcagctgtatgcgcagaacaagctg
gtcgaggcgcagcggctggcgcagcgcacccagttcgacctggagatgatggccgaggtc
ggctactgcaacggcatcgagaactactcccggcacctcaccggcaaggcgcccggcgag
ccgccgccgaccttgttcgactacctgccggccgacgcgctgctggtcgtcgacgagtcg
cacgtcaccgtcccgcagatcggcgcgatgtacaagggcgaccgctcgcgcaaggagacg
ctggtggagttcggtttccgcctgccgtcggcgctggacaaccggccgctgcgcttcgag
gaatgggaggcgcgttcgccgcgcagcatctacgtgtcggccacgcccggcccatacgag
ctgcgcgaatcggccggggagatcaccgagttggtggtgcgaccgaccggactgatcgat
ccggaagtggagatccgcccggtcgggacccaggtcgacgacctgctgtcggagatcggg
ctgcgcgtggcgctgggcgaccgcgtgctggtcaccacgctgaccaagcgcatggccgag
aacctcaccgagtacctgggcgagcacggggtcaaggtgcgctacctgcactcggacatc
gacacggtcgagcgcgtggaaatcatccgcgacctgcgcctgggcaagttcgacgtgctg
gtcggcatcaacctgctgcgcgagggcctggacatgcccgaggtgtcgctggtggcgatc
ctggacgcggacaaggaaggcttcctgcggtccaccggttcgctgatccagaccatcggc
cgcgccgcgcgcaacttgcgcggcaaggcgatcctgtacgcggacaggatgacccgctcg
atgcaagcggcgatcgacgagaccggacggcgtcgcgagaagcaggtggagtacaacctg
gagcacggcatcaccccgaagtcggtggcgcggccgatcgtggacatcctggagggcgcg
cgtggcgacgccgccgtcgaggccaagtcgggcaagggcaagggacgccgggtggcggag
gagccggccgactaccgcatgctggatccggccgaggtcgcatcccggctcaaggcgctg
gaacagaagatgtaccagcacgcccgcgacctggagttcgaggacgcggcgcgcgtgcgc
gaccagatcaagaagctgcgcgatgccagcctggtcagctag
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