Xanthomonas sp. CFBP 8443: NUG20_16165
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Entry
NUG20_16165 CDS
T11514
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NUG20_16165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xaf02022
]
NUG20_16165
02035 Bacterial motility proteins [BR:
xaf02035
]
NUG20_16165
Two-component system [BR:
xaf02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
NUG20_16165
Bacterial motility proteins [BR:
xaf02035
]
Pilus system
Twitching motility proteins
NUG20_16165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_16
AAA_5
AAA_19
HTH_30
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UYC19693
LinkDB
All DBs
Position
3870990..3872378
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AA seq
462 aa
AA seq
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MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIARHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDIHVLRGLVKHAL
ELNNTERAAPPAPPPEQASRLLGASTAMDALRATIAKVARSQAPVYILGESGVGKELVAR
TIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADQAGLFQAAQGGTLFLD
EVAELPLPMQVKLLRAIQEKSVRPVGAATEVPTDVRILSATHKDLADLVADGRFRHDLYY
RINVIELRVPPLRERGGDLPQLAAAILARLAKGHGRITPLLSPSALDALNRYAFPGNVRE
LENILERALAMAEDDQISAADLHLPQPGNSARAAAEAAPALPPGVVDIDPTSSALPSYIE
QLERAAIQKALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgaagcgcccttgtcgtcgacgacgaacgcgacatccgcgaactgctg
gtactgaccctgggcaggatggggctgcgcatcagcaccgccgccaacctcgccgaagcc
cgcgaactgctggccagcaacccctacgacctgtgcatcaccgacatgcgcctgcccgat
ggcaacggcatcgagctggtcagcgagatcgcccgccactatccgcgcacgccggtggcg
atgatcaccgcgttcggcagcatggacctagcggtggaagcgctgaaggccggcgccttc
gacttcgtcagcaagccggtggacatccacgtgctgcgcggcctggtcaagcacgcactg
gaactcaacaacaccgagcgcgccgcgccgccggcgccgccgccggagcaggccagccgc
ctgctcggcgcctcgaccgcgatggacgcgctgcgcgccaccatcgccaaggtcgcgcgc
agccaggcgccggtgtacatcctcggcgagtccggcgtcggcaaggaactggtcgcgcgc
accatccacgaacagggcgcgcgcgcggccgggccgttcgtgccggtcaactgcggcgcg
atcccggccgaactgatggaaagcgagttcttcggccacaagaagggcagcttcaccggt
gcccacgccgaccaggccggcctgttccaggccgcgcagggcggcaccctgttcctggac
gaagtggccgagctgccgctgccgatgcaggtcaagctgctgcgcgcgatccaggagaag
tcggtgcgcccggtcggcgccgccaccgaggtgccgaccgacgtgcgcatcctgtcggcc
acccacaaggacctggccgacctggtcgccgacggccgcttccgccacgacctgtactac
cgcatcaacgtgatcgaactgcgcgtgccgccgctgcgcgagcgcggcggcgacctgccg
caactggctgcggcgatcctggcacggctggccaagggccatggccggatcaccccgctg
ctgtcgccatcggcgctggacgccctgaaccgctacgccttccccggcaacgtgcgcgaa
ctggagaacatcctcgagcgcgccctggcgatggccgaggacgaccagatcagcgccgcc
gacctgcacctgccgcagcccggcaacagcgcccgcgccgcggccgaagccgcccccgcc
ctgccgcccggcgtggtcgatatcgacccgacctcctccgccctgccctcctacatcgag
cagctcgaacgcgccgcgatccagaaggcgctggaggaaaaccgctggaacaagacccgc
accgccgcccagctcggcatcaccttccgcgcgctgcgctacaagctcaagaagttgggg
atggagtag
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