Xanthomonas sp. CFBP 8443: NUG20_18275
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Entry
NUG20_18275 CDS
T11514
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
xaf Xanthomonas sp. CFBP 8443
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xaf02022
]
NUG20_18275
Two-component system [BR:
xaf02022
]
NtrC family
Unclassified
NUG20_18275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_28
HTH_30
HTH_29
HTH_50
AAA_16
Phage_NinH
HTH_23
AAA_2
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
UYC20088
LinkDB
All DBs
Position
complement(4379313..4380647)
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AA seq
444 aa
AA seq
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MARILIVDDDTAFLSTLQATLRSFGHEVIAAADGEAGLARLREGGIDLAFVDFRMPGMDG
IALMRARQAHAQAAAVPLVMLTAYASSSNTIEAMKLGAFDHLVKPVGRADIVAVVERALQ
AHAGSAAPPQAPAEDAGALLGHSAAMRTVHKRIGLAAASDLPVLISGETGTGKELVARAL
HHASARTGSFVAVNCAAIPIELMESELFGYRKGAFSGAVADRPGLIREADGGTLFLDEIG
DMPLPMQAKLLRFLQEGEVSPLGGRGAQKVDVRVVAATHRELAQLVADGRFRSDLRYRLN
VVPIELPPLRERGDDIVLLAQHFLEDGASAARTLSAAAQARLRAYPWPGNVRELRNAMQR
CQVLVRTPTIEAHDLDEVLAGDGAGDAVAADAPALTLPDAVAQLEKRMIQAALAQAQGNR
AEAARRLGIHRQLLYRKLDDYGLG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatcctgatcgtcgacgacgacaccgccttcctgagtacgctgcaggccacg
ctgcgctcgttcggccacgaggtgatcgccgctgccgatggcgaagcggggctggcgcga
ttgcgcgaaggcggcatcgacctggccttcgtcgatttccgcatgcccggcatggacggc
atcgcgctgatgcgcgcgcgccaggcgcacgcgcaggccgccgcggtgccgctggtgatg
ctcaccgcctacgcgtccagcagcaacaccatcgaggcgatgaaactcggcgcgttcgat
cacctggtcaagccggtagggcgcgccgacatcgtcgcggtggtggagcgcgcgctgcag
gcgcacgcaggcagcgcggcgccgccgcaggcgccggccgaggacgccggcgcgctgctc
gggcacagtgcggcgatgcgcaccgtgcacaagcgcatcggcctcgccgcggcctccgac
ctgccggtgctgatcagcggcgagaccggcaccggcaaggaactggtggcgcgcgcgctg
catcacgccagcgcgcggacgggctccttcgtcgcggtcaactgtgcggcgatcccgatc
gagctgatggagagcgagctgttcggctaccgcaagggcgccttctccggcgccgtcgcc
gatcgtcccgggctgatccgcgaggccgacggcggcaccctgttcctggacgagatcggc
gacatgccgctgccgatgcaggccaagctgctgcgtttcctgcaggaaggcgaggtatcg
ccattgggcgggcgcggcgcgcagaaggtggacgtgcgcgtggtcgccgcgacccatcgc
gaactggcgcagctggtcgccgacggccgcttccgcagcgacctgcgctaccggctcaac
gtggtgccgatcgaactgccgccgctgcgcgagcgcggcgacgacatcgtgctgctggca
cagcatttcctcgaggacggcgccagcgcggcgcgcacgctgtcggctgcggcgcaggcg
cggctgcgcgcgtatccatggccgggcaacgtgcgcgagctgcgcaacgcgatgcagcgc
tgccaggtgctggtgcgcacgccgacgatcgaggcgcacgacctggacgaggtgttggca
ggcgatggcgccggcgatgcggtcgccgcggatgcgccggcgctgaccctgcccgacgcg
gtggcgcaactggagaagcggatgatccaggcagcgctggcgcaggcgcagggcaatcgc
gccgaagccgcgcgccggctcggcatccaccgccaactgctgtaccgcaagctcgacgac
tacgggctgggctag
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