Xanthomonas sp. CFBP 8443: NUG20_21360
Help
Entry
NUG20_21360 CDS
T11514
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NUG20_21360 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xaf03400
]
NUG20_21360 (recD)
Enzymes [BR:
xaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NUG20_21360 (recD)
DNA repair and recombination proteins [BR:
xaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NUG20_21360 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
AAA_22
NAT10_TcmA_helicase
DEAD
T2SSE
Herpes_Helicase
AAA_16
nSTAND3
SLFN-g3_helicase
UvrD_C
AAA_28
Rad17
ATPase
Motif
Other DBs
NCBI-ProteinID:
UYC20640
LinkDB
All DBs
Position
complement(5114327..5116324)
Genome browser
AA seq
665 aa
AA seq
DB search
MNQPNLLTALHRSGTLRTLDHAFAQTLSRLAPDTPDLVLSAAALASLAVASGHAGLDPAR
ASVLLDPRDGPPPQLPDPTDWQRALSASRWIAQPAQEDPSAADCPLVLEHGLLYLRRYRE
YERRLAQGLRRIAAHPLPAFDVAALAPLFAQLFPLPSATEGSPRGKEGARSGSKGMSAPD
QPTDRQAQAAALALRRALLLVTGGPGTGKTTTIARLLLLRIAQAQATDSAAPRIALAAPT
GRAAERMAESLRTAVARAIESGIDPTLAAALPAGASTLHRLLGVIPDLPRFRHDADNPLP
FDLIVVDEASMVDLPLMCKLVEAVADGTQLILLGDADQLPSVEAGDVLAAILQAAGPGDA
LQPDDAQALQPLLGHTHADTRGGGLSGHRVHLLRGYRQAQGFALAPLADAVRAGDADTAL
ALLRSGDLAGVHFHEDSEDPLAARRDALLAHWRALADAADPAHALRDAARLRLLSAVRAG
PQGARGLNARIEQLLADSGAGARRLGAASPWFHGRLLLITENSYRHGLFNGDVGICLRDA
QGALVAWFEGEGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFEEVWLQLPTRDVRVLSR
ELVYTGLTRARQTLHLAASEAVLRAALARHAARISGLAWRLGEADVPVAVEASPAPAAPT
QGTLF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccaacccaacctcctgaccgccctccaccgtagcggcacgctacgcacgctcgac
cacgccttcgcccaaaccctgagccgcctggccccggacacccccgacctggtcctgtcc
gccgccgccctggcttcactggcagtcgccagcggccacgccggcctcgacccggcccgc
gccagcgtcctgctcgacccgcgcgacggcccgccgccgcaactcccggacccgaccgac
tggcaacgcgccctgtccgcctcgcgctggatcgcccagcccgcgcaggaggacccatcg
gctgccgactgcccgctggtgctggaacacggcctgctctacctgcgccgctaccgcgaa
tacgagcgtcgcctggcgcagggcctgcgccgcatcgccgcgcacccgctgccggccttc
gacgtcgccgcgctcgccccgctgttcgcgcagctgttcccgctcccatcggcgaccgaa
ggaagtccccgcgggaaagagggtgcccgaagcgggagtaagggcatgtccgcccccgac
caacccaccgaccgccaagcccaggccgccgcactcgccctgcgccgcgccctgctgctg
gtcaccggcggccccggcaccggcaagaccaccaccattgcccgcctgctgctgctgcgc
atcgcccaggcgcaggccacggacagcgccgccccgcgcatcgccctggccgcgcccacc
ggccgcgccgccgaacgcatggccgagagcctgcgcaccgccgtggcgcgcgccatcgaa
agcggcatcgatccgaccctggccgccgcattgccggccggcgccagcacgctgcaccgc
ctgctcggcgtgatccccgacctgccgcgcttccgccatgacgccgacaacccgctgccg
ttcgacctgatcgtggtcgacgaagcctcgatggtcgacctgccgctgatgtgcaagctg
gtcgaagccgtcgccgacggcacccagctgatcctgcttggcgatgccgaccagttgccc
tcggtcgaagccggcgacgtgcttgccgccatcctgcaggccgccggccccggcgacgca
ctgcagccggacgacgcgcaagcgctgcaaccgctgctcggccacacccacgccgacacc
cgcggcggcggcctgtccgggcatcgcgtgcacctgctgcgcggctaccgccaggcgcag
ggtttcgcactggcgccgctggccgacgccgtgcgcgccggggacgccgacaccgccctg
gccctgctgcgcagcggcgacctggccggcgtgcacttccacgaagacagcgaagacccg
ctcgccgcccgccgcgacgccctgctcgcgcactggcgcgccctggccgacgccgccgat
cccgcccatgccctgcgcgacgccgcgcgcctgcgcctgctcagcgccgtgcgtgccggc
ccgcaaggcgcgcgcggcctcaacgcccgcatcgaacagttgctggccgacagcggcgcc
ggcgcccgccgcctcggcgccgcctcgccctggttccacggccgcctgctgctgatcacc
gaaaacagctaccgccatggcctgttcaacggcgacgtcggcatctgcctcagggacgcg
cagggcgccctggtggcctggttcgaaggcgagggcgacggccaggtccgcggcttccac
cccgccgccttgcccgcgcacgaaagcgccttcgcgatgaccgtgcacaaggcgcaaggc
agcgagttcgaggaagtgtggctgcagctgccgacgcgcgacgtgcgtgtgctcagtcgc
gaactggtctacaccggcctgacccgcgcccggcagaccctgcacctggctgccagcgaa
gccgtgctgcgcgccgcgctggcgcgacatgcggcgcggatctcggggttggcgtggcgc
ttgggtgaagcagacgtgccggtcgccgttgaggcatccccggcacccgcggcgcccacg
cagggcacgctgttctga
DBGET
integrated database retrieval system
