Xanthomonas sp. GW: HEP73_00330
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Entry
HEP73_00330 CDS
T08755
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
xag
Xanthomonas sp. GW
Brite
KEGG Orthology (KO) [BR:
xag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xag03019
]
HEP73_00330 (hrpB)
Enzymes [BR:
xag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HEP73_00330 (hrpB)
Messenger RNA biogenesis [BR:
xag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HEP73_00330 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
HA2_N
Motif
Other DBs
NCBI-ProteinID:
QNH19440
UniProt:
A0A7G7SRS0
LinkDB
All DBs
Position
complement(369447..371141)
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AA seq
564 aa
AA seq
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MVLATNVAESSVTLPGVRVVIDAGLAREPHYDPNSGFSRLDVTAIAQASADQRAGRAGRV
ASGWAYRLWPQSQRLEAQRRAEMLQVELAGLALELAAWGSDALRFVDPPPAGALAAAREL
LQRLGALSENHAITASGRRMLALGTHPRLAAMLLAAPDARAQALACDLAALVEARDPLRQ
GGDALAARWRALAGFRRGRAPHDANRGGLAAIDAAAKQWRRRLRSDAAAPDSVEAHELGD
LLAHAFPDRIATRHPADPLRYLLANGRSARLFEHSDLRGEPWLVATELRYEAKDALLLRA
APVDEARLRVDFPQRFVQQDVVRWDAERRALSALRETRFDRIVLDSRPAGRVDPSHAAAA
LTEAVRELGLQALPWSEPLTQWRARVVALRTWMPELDLPDLGDAALLEGLDGWLRPAFAG
KTRLDALGEDDLGEALKSLLPWDRRQAVDRHAPTRITVPSGMERRIDYALDHAGQPQPPV
LAVKLQELFGLADTPRVADGRVALLLHLLSPGGRPLQVTQDLRNFWSSTYPEVKKEMKGR
YPRHPWPDDPWTATASHRAKPRGT
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggtgctggcgaccaacgtggccgaatcgtcggtgaccctgcccggcgtgcgcgtggtg
atcgatgccggcctggcgcgcgagccgcactacgatcccaacagcggcttctcgcggctg
gacgtcaccgccatcgcccaggcctcggccgaccagcgcgccggccgcgccggccgtgtc
gcctccggctgggcctaccggctgtggccgcagtcgcagcgcctggaggcacagcgccgc
gcggaaatgctgcaggtggaactggccgggctggcgctggaactggcggcctggggcagc
gacgccttgcgcttcgtcgatccgccgccggccggcgcgctggccgccgcgcgcgaactg
ctgcagcggctcggcgccttgagcgagaaccatgcgattaccgccagcggccggcgcatg
ctcgcgctgggcacccacccgcggctggcggcgatgctgctggccgcgccggatgcgcgg
gcgcaggcgctggcctgcgacctggccgcgctggtcgaggcgcgcgatccgctgcgccag
ggcggcgacgcgctggcggcgcgctggcgcgcactggccggcttccgccgcggccgcgcc
ccgcacgatgccaaccgcggcggcctggccgcgatcgacgcggcggccaagcaatggcgg
cggcgcctgcgcagcgacgccgccgcgccggacagtgtggaagcgcatgaactcggagac
ctgctggcccacgccttccccgaccgcatcgccacccggcatccggccgatccgctgcgc
tacctgctggccaacggccgcagcgcacgcctgttcgagcacagcgacctgcgcggcgag
ccgtggctggtcgccaccgaactgcgctacgaggccaaggacgcgctactgctgcgcgcc
gcgccggtggacgaagcgcggctgcgcgtggacttcccgcagcgcttcgtgcagcaggac
gtggtgcgctgggacgccgagcggcgtgcgttgagcgcgctgcgcgaaacccgcttcgac
cgcatcgtgctcgacagccgccccgccggccgcgtcgatccgtcgcacgcggcggcggcg
ctgaccgaggcggtgcgcgaactcggcctgcaggcgctgccgtggagcgaaccgttgacc
cagtggcgcgcgcgcgtggtcgcactgcgcacctggatgccggagctggacttgcccgat
ctcggcgatgcggcgttgctggaaggcctggacggctggctgcgccccgccttcgccggc
aagacccggctcgacgcgctgggcgaagacgacctcggcgaggcgttgaagtcgctgctg
ccgtgggaccggcggcaggccgtcgatcgccatgcgccgacgcggatcaccgtgccctca
ggcatggagcggcgcatcgactacgcgctcgatcacgccggccagccgcaaccgccggtg
ctggcggtgaagctgcaggaactgttcggcctggccgacaccccgcgcgtcgccgacggc
cgcgtggcgctgctgctgcacctgctctcgcccggcggacgcccgttgcaggtgacccag
gacctgcgcaacttctggtccagcacctatccggaagtgaagaaggaaatgaagggccgc
tatccccgccacccgtggccggacgacccgtggaccgccaccgccagccatcgcgcgaag
ccgcgtggcacctga
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