Xanthomonas sp. GW: HEP73_01353
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Entry
HEP73_01353 CDS
T08755
Symbol
pelB
Name
(GenBank) pectate lyase II
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xag
Xanthomonas sp. GW
Pathway
xag00040
Pentose and glucuronate interconversions
xag01100
Metabolic pathways
xag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HEP73_01353 (pelB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEP73_01353 (pelB)
Enzymes [BR:
xag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HEP73_01353 (pelB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
QNH20453
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All DBs
Position
1650675..1651739
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AA seq
354 aa
AA seq
DB search
MNIQPLKGALALALVFCASPAVAGPVGYGAATTGGGNAIPINVATMEAMQAAINNYSGSG
GLVLNYTGQFNFASIGNVCAQWQLPAKTVQIKNKSNITIKGANGSSANFGLWVGGNAHNI
IIRNMTIGLLPGGEDADSISLEGNSSGEPSNIWIDHNTVFASLTKCSGAGDASFDGGIDM
KKGAHHVTVSYNYVHDYQKVALNGYSDNDTKNAAARTTYHHNRFENVESRLPLQRRGLSH
IYNNYFNNVLTSGINVRMGGIALIEANYFENAKNPVTSRDSSEIGYWDLINNYVGGGITW
SVPDSTSKPYANATTWISSKTFPQPIGYVYTATPAAQVKAKVIATAGAGTNLAE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccagccgctcaagggcgcgctcgcgcttgccctggttttctgcgcatcgccg
gccgtcgccggtccggtcggctacggcgccgccaccaccggcggcggcaacgcgattccg
atcaacgtcgccacgatggaggcgatgcaggccgcgatcaataattattccggcagcggc
ggcctggtgctgaactacaccggccagttcaacttcgccagcatcggcaacgtctgcgcg
cagtggcagttgccggccaagaccgtgcagatcaagaacaagagcaacatcaccatcaag
ggtgccaacggttcctcggcgaacttcggcctgtgggtgggcggcaatgcgcacaacatc
atcatccgcaacatgaccatcggcctgctgcccggcggcgaggatgcggactcgatctcg
ctggaaggcaactccagcggcgagccgtccaatatctggatcgaccacaacaccgtgttc
gcctcgctgaccaagtgctccggcgccggcgacgcctccttcgacggtggcatcgacatg
aagaagggcgcccaccacgtcaccgtgtcgtacaactacgtgcacgactaccagaaggtc
gcgctcaacggctacagcgacaacgacaccaagaacgccgccgcgcgcaccacctaccac
cacaatcgcttcgagaacgtggaatcgcggctgccgctgcaacgccgcgggctgagccac
atctacaacaactacttcaacaacgtgctcacctccggcatcaacgtgcgcatgggaggg
atcgcgctgatcgaggccaactacttcgagaacgcgaagaacccggtgacctcgcgcgac
agcagcgagatcggctactgggacctgatcaacaactacgtcggcggcggcatcacctgg
agcgtgccggacagcaccagcaagccctacgccaacgccacgacctggatttcgtcgaag
acgttcccgcagccgatcggctacgtctataccgcgaccccggcggcgcaggtcaaggcc
aaggtcatcgccaccgccggcgcgggcaccaacctggccgagtag
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