Xanthomonas sp. GW: HEP73_02773
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Entry
HEP73_02773 CDS
T08755
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xag
Xanthomonas sp. GW
Pathway
xag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP73_02773 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xag03019
]
HEP73_02773 (pnp)
03016 Transfer RNA biogenesis [BR:
xag03016
]
HEP73_02773 (pnp)
Enzymes [BR:
xag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HEP73_02773 (pnp)
Messenger RNA biogenesis [BR:
xag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HEP73_02773 (pnp)
Transfer RNA biogenesis [BR:
xag03016
]
Prokaryotic type
tRNA degradation factors
HEP73_02773 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
KhpA-B_KH
Phage_tube
S1_2
KH_5
Motif
Other DBs
NCBI-ProteinID:
QNH21844
UniProt:
A0A7G7SYM4
LinkDB
All DBs
Position
complement(3286522..3288630)
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFNGPIGAAKVGYKNGEYILNPTITELKDSQLELVVAG
TANAVLMVESEAALLSEEVMLGAVTFGHREMQKVINIINELTVEAGTKPSDWVAPAKNEG
MIAALKEAVGDQLASAFQVRDKLQRRDAISAIKKDVLAQLTPRAAVEGWVVADLSKEFGE
LEYQTMRGSVLSTKVRIDGRALDTVRPISVKAGVLPRTHGSALFTRGETQAIVITTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPSME
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALAQAKAGRLHILGEMAS
ALTTPRSELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSDRV
EKVSDVLKEGDLVKVKVLEVDKQGRIRLSMKAVEEGEGVTAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcaccctcgaaaccggc
gagatcgcccgccaggccggcggcgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaaggtcaggacttcttcccgctgacggtc
gactatcaggagaagttctacgccggcggccgcatccccggcggcttcttcaagcgcgag
ggtcgtgcgaccgagaaggagacgctgatttcgcgtctgatcgaccgtccgatccgtccg
ctgttcccggaggactacaagaacgaagtgcagatcatcgccacggtgatgtcgatgaac
ccggacatcgacggcgacatcgccgcgctgatcggcgcctcggccgcgctgtcgctggcc
ggcaccccgttcaacggcccgatcggcgccgccaaggtcggctacaagaacggcgagtac
atcctcaacccgaccatcaccgagctgaaggattcgcagctggagctggtcgtggccggt
accgccaatgcggtgctgatggtcgagtcggaagcggcgctgctgtcggaagaagtgatg
ctgggcgcggtcaccttcggccatcgcgagatgcagaaggtcatcaacatcatcaacgag
ctgaccgtcgaagccggcaccaagccgtccgactgggtcgccccggcgaagaacgaaggc
atgatcgcggcgctgaaggaagcggtcggcgatcagctggcctcggccttccaggtgcgc
gacaagctgcagcgtcgcgacgcgatctcggcgatcaagaaggacgtgctggcgcagctg
acgccgcgcgccgccgtcgaaggctgggtcgttgccgacctgtccaaggaattcggcgaa
ctggaataccagaccatgcgcggctcggtgctgagcaccaaggtgcgcatcgacggccgt
gcgctggacacggtgcgtccgatcagcgtcaaggccggcgtgctgccgcgtacccatggc
tcggcgctgttcacccgcggcgagacccaggcgatcgtcatcaccacgctgggcaccgcc
cgcgacggccaggtgatcgacgcggtcagcggcgagtacaaggaaaacttcctgttccat
tacaacttccccccctactcggtgggcgagtgcggccgcttcggcgcgccgaagcgtcgc
gagatcggccacggccggctcgccaagcgcggcgtgctggcagtgatgccgagcatggaa
gagttcccgtacacgatccgcgtggtctcggaaatcaccgagtccaacggttcctcgtcg
atggcctcggtgtgcggcagctcgctggcgctgatggacgccggcgtgccggtgaaggca
ccggtcgcgggcatcgcgatgggcctggtcaaggaaggcgacgacttcgtggtgctgtcg
gacatcctgggcgatgaagatcacctgggcgacatggacttcaaggtcgccggtaccgcc
gaaggcgtgtccgcgctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggccctggcgcaggccaaggccggccgcctgcacatcctcggcgagatggccagc
gcgctgaccaccccgcgttcggagctgagcgactacgcgccgcgcctgctgacgatcaag
atccacccggacaagatccgcgaagtgatcggcaagggcggctcgaccatccaggcgatc
accaaggaaaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcctcg
gtcaacgcgatcgccgcgcaggccgccaaggcgcgcatcgagcagatcacctcggacgtg
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtc
accatcctgccgggcaaggacggcctggtgcacgtgtcgcagatctccagcgaccgcgtg
gagaaggtcagcgacgtgctgaaggaaggcgatctggtcaaggtcaaggtgctggaagtc
gacaagcagggccgcatccgcctgtcgatgaaggccgtggaagaaggcgagggcgtgacg
gccgagtaa
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integrated database retrieval system
