Xanthomonas sp. GW: HEP73_02977
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Entry
HEP73_02977 CDS
T08755
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
xag
Xanthomonas sp. GW
Brite
KEGG Orthology (KO) [BR:
xag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xag03009
]
HEP73_02977
Enzymes [BR:
xag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HEP73_02977
Ribosome biogenesis [BR:
xag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HEP73_02977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
MTS
Methyltr_RsmB-F
RrnaAD
Methyltransf_11
Cons_hypoth95
TRM5-TYW2_MTfase
UPF0020
Methyltransf_12
Methyltransf_23
Methyltransf_15
TRAM
PrmA
CMAS
Ubie_methyltran
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QNH22046
UniProt:
A0A7G7SZ76
LinkDB
All DBs
Position
complement(3529672..3531024)
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AA seq
450 aa
AA seq
DB search
MARSRKRLDRTPFQTDIVDLSHDGRGVARPEGEGGKVAFVAGALPGETVLAEPTARNRHF
DEARTLQVLQASPQRVEPRCPHFGVCAGCVLQHLAEDQQILAKQRVLTENLERIGHVTPQ
TVLPPLSGAPWGYRRKGRFSVRRVEKKDKTLVGFRELDPRFVADLSVCHTVIPQIGFKVS
ALAELVESLDGKRDIPQIEFIAGDDAVALTFRHMQPLSARDQDALVAFAQAHEFAIFLQP
GGVDSVHPLYPQQVPLSFRLPQWDVELAFRPLDFIQVNASLNQKMIALALTLLDAQPGDR
VLDLFCGLGNFTLPLARTVREVVGVEGDAGLVARARDNAQRNGLDNAQFFAADLTQDQRQ
APWMQQGFDKLLLDPPRSGAIEVLRQLPLDSFQRIVYVSCHPGSLARDAGYLVNEQGFVL
KAAGAMDMFPHTAHVESIAVFEKPGIGNGE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgatccagaaaacgcctagaccgcaccccgttccagaccgatatcgtcgacctc
agccacgacggccgcggcgtcgcccgccccgagggcgagggcggcaaggtcgccttcgtc
gccggcgcgctgccgggcgagacggtgcttgccgaacccaccgcgcgcaaccgccatttc
gacgaggcgcgcaccctgcaggtgctgcaggcctcgccgcagcgggtcgagccgcgttgc
ccgcatttcggggtctgcgccggctgcgtgctgcagcacctggccgaggaccagcagatc
ctggccaagcagcgggtgctgaccgagaacctggagcggatcggccacgtgaccccgcag
acggtgttgccgccgctgtccggcgcaccctggggctaccggcgcaagggccggttctcg
gtgcgccgggtggagaagaaggacaagaccctggtcggcttccgtgagcttgatccgcgc
ttcgtcgccgacctgtcggtgtgccacacggtgattccgcagatcggcttcaaggtgagc
gcactggccgaactggtcgagagcctggacggcaagcgcgacatcccgcagatcgaattc
atcgccggcgacgacgccgtggcgctgaccttccgccacatgcagccgctcagcgcgcgc
gaccaggacgcgctggtggcgttcgcccaggcccacgagttcgccatcttcctgcagccc
ggcggcgtggacagcgtgcatccgttgtatccgcagcaagtgccgctgtcgttccgcttg
ccgcaatgggacgtggagctggcgttccggccgctggacttcatccaggtcaacgcctcg
ctcaaccagaagatgatcgcgctggcgctgaccctgctcgacgcgcagcccggcgaccgc
gtgctcgacctgttctgcgggctgggcaatttcaccctgccgctggcgcgtacggtgcgc
gaggtggtgggcgtggaaggcgacgcggggctggtggcgcgggcgcgcgacaacgcgcag
cgcaacggcctggacaacgcgcagttcttcgccgccgacctgacccaggaccagcgccag
gcgccgtggatgcagcagggtttcgacaagctgctgctcgacccgccgcgctccggcgcg
atcgaggtgctgcggcagctgccgttggacagcttccagcgcatcgtctacgtcagctgc
cacccgggctcgctggcgcgcgacgccggctacctggtcaacgagcagggcttcgtgctg
aaggccgccggcgcgatggacatgttcccgcataccgcgcatgtggagagcattgcggtg
tttgagaagccgggaatcgggaatggggaatag
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