Xanthomonas sp. GW: HEP73_03394
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Entry
HEP73_03394 CDS
T08755
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
xag
Xanthomonas sp. GW
Pathway
xag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HEP73_03394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xag03021
]
HEP73_03394
03400 DNA repair and recombination proteins [BR:
xag03400
]
HEP73_03394
Enzymes [BR:
xag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HEP73_03394
Transcription machinery [BR:
xag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HEP73_03394
DNA repair and recombination proteins [BR:
xag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HEP73_03394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QNH22451
UniProt:
A0A7G7T0D1
LinkDB
All DBs
Position
complement(3988593..3992810)
Genome browser
AA seq
1405 aa
AA seq
DB search
MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSFGEVKKPETINYRTFKPERDGLFCAA
IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTALERRQLLTEEQFLTARQEHGDDFDAAM
GAEAVYELLRTIDLQSEMTRLREEIAGTGSETKLKRLTKRIKLVEAFLESGNRPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHECGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANIAEVKRAYDNR
VVELHAKVKVRITETVIDEDGSRSKKTSIVDTTIGRALLAEILPDGLPFALANTELTKKN
ISRLINSSYRQLGLKDSVVFADKLMYTGFAYATRAGVSIGIDDMLIPSEKKGILGEAEQE
VLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAMMDTIGTEKVTNAKGEIIDQKSMN
SLYIMADSGARGSQAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVQEYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEPDCGTSDGLTMTPIVEGGDVVEPLKDRVL
GRVVAEDVFLPGNDEDPIVTRNTLLDEQWVAKLEEAGVQTLKVRSTITCESSFGVCARCY
GRDLARGHLVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNITVKTTGSIK
FNNLKSVEHANGSLVAVSRSGELSVLDGHGRERERYKLAYGATITAKDGDAVKAGQSVAN
WDPHNHPIVSEVAGFIRFIDFIDGVTVIEKTDDLTGLASREITDPKRRGAQAKDLRPIVR
IVDGKGNDLTIPGTDLPAQYLLPPRSIVNLQDGAAVGVGDVVAKIPQEASKTRDITGGLP
RVADLFEARKPKDPAILAERSGIISFGKDTKGKQRLIIKDTDGSEHEELIPKYRQIIVFE
GEHVAKGETVVDGEPSPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEVITRQM
LRKVEITDQGNSKFLNGEQAERQRVIEENARLVPRNELPAKYDPVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTSDTLRGLKENVIVGRLIPAGTGLAYHAQRRRGASGLTESE
MQTLSGGNAEAAVETPAPAAASSEE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgctcaacctcttcaaccagcagcgccagacgctggacttcgacgcgatc
aagatcgcgttggcctcgccggacctgatccgttcgtggtccttcggcgaagtgaagaag
ccggaaacgatcaactaccgtaccttcaagcccgagcgcgacggcctgttctgcgccgcg
atcttcggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgtggcgtggtctgcgagaagtgcggcaccgaagtgaccctggccaaggtgcgccgcgag
cgcatgggccacatcgacctggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgcatcggcctgatgctggacatgaccctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctatgtggtgaccgagccgggcctgaccgccctggagcgccgccagctgctg
accgaagagcagttcctgaccgcgcgccaggagcacggcgacgacttcgacgccgcgatg
ggcgccgaggcggtgtacgagctgctgcgcacgatcgacctgcagtcggaaatgacccgc
ctgcgcgaagagatcgccggcaccgggtcggaaaccaagctcaagcgtctgaccaagcgc
atcaagctggtcgaagccttcctcgagtcgggcaaccgtccggagtggatggtgatgacc
gtgctgccggtgctgccgccggatctgcgtccgctggtgccgctggacggcggccgcttc
gcgacctccgatctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgcgt
cgcctgcttgagctcaatgcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaatcggtggatgcgctgctggacaacggccgccgcggccgtgccatcaccggcacgaac
aagaggcctttgaagtcgctagccgacatgatcaagggcaagcagggccggttccgccag
aacctgctcggcaagcgcgtggactactccggccgttcggtcatcgtggtcggcccgacc
ctgcgtctgcacgagtgcggcctgccgaagaagatggcgctggaactgttcaagccgttc
gtgttcgccaagctgcagcgtcgcggcctggccaccaccatcaaggccgccaagaagctg
gtcgagcgcgaagaagccgaagtctgggacatcctggaagaggtcatccgcgagcacccg
gtgctgctgaaccgtgcgccgaccctgcaccgtctgggcatccaggcgttcgagccggtg
ctgatcgaaggcaaggcgatccagctgcatccgctggtgtgtaccgcgttcaacgccgac
ttcgacggtgaccagatggccgtgcacgtgccgctgtcgctggaagcgcagctggaagcg
cgcgcgctgatgatgtccaccaacaacatcctgtcgccggccaacggcgagccgatcatc
gtgccgtcgcaggacgtggtgctgggcctgtactacatgagccgcgccctggagaacaag
aagggcgagggcatggtgttcgccaacatcgccgaagtgaagcgcgcctacgacaaccgc
gtggtcgaactgcacgccaaggtcaaggtccgcatcaccgagacggtgatcgacgaggac
ggcagccgcagcaagaagacctcgatcgtggacaccacgatcgggcgcgcgctgctggcc
gaaatcctgccggacggcctgccgttcgcgctggccaacaccgagctgaccaagaagaac
atcagccgcctgatcaactccagctaccgccagctgggtctgaaggacagcgtcgtgttc
gccgacaagctgatgtacaccggcttcgcctacgcgacccgcgccggcgtgtcgatcggc
atcgacgacatgctgatcccgtcggagaagaagggcatcctcggcgaagccgagcaggaa
gtgctggaaatccaggagcagtaccagtccggtctggtcaccgccggcgagcgctacaac
aaggtcgtggacatctggtcgcgcaccaacgagcgcatcgccaaggcgatgatggacacc
atcggtaccgagaaggtcaccaatgccaagggcgagatcatcgaccagaagtcgatgaac
tccctgtacatcatggccgactccggtgcgcgtggtagccaggcgcagatccgtcagctg
gccggtatgcgcggcctgatggcgcgtccggacggctcgatcatcgagaccccgatcaag
gccaacttccgcgaaggcctgaacgtgcaggagtacttcaactccacccacggcgcgcgt
aagggtctggccgataccgcgctgaagaccgccaactcgggttacctgacccggcgtctg
gtcgacgtggcgcaggacgtggtcatcaccgaaccggattgcggcaccagcgacggcctg
accatgaccccgatcgtggaaggcggcgacgtggtcgagccgttgaaggatcgcgtgctc
ggccgcgtggtggccgaggacgtgttcctgccgggcaacgacgaggatccgatcgtcacc
cgcaacacgctgctcgacgagcagtgggtggccaagctggaagaggccggcgtgcagacg
ctgaaggtgcgctccacgatcacctgcgaatcctcgttcggcgtgtgcgcccgctgctac
ggccgcgacctggcgcgcggtcacctggtcaacatcggcgaagcggtcggcgtcatcgcc
gcgcagtcgatcggcgagccgggtacccagctgaccatgcgtaccttccacatcggcggc
gcggcatcgcgtgcggcggcggtggacaacatcacggtcaagaccaccggttcgatcaag
ttcaacaacctcaagtcggtcgagcacgccaacggttcgctggtggcggtgtcgcgttcg
ggcgaactgtccgtgctcgacggccacggccgcgagcgcgagcgctacaagctggcctac
ggcgccacgatcaccgcgaaggacggcgacgcagtcaaggccggccagtcggtcgccaac
tgggatccgcataaccacccgatcgtgtcggaagtggccggtttcatccgcttcatcgac
ttcatcgacggcgtcaccgtcatcgagaagaccgacgatctgaccggcctggcctcgcgc
gagatcaccgatccgaagcgtcgcggcgcccaggccaaggacctgcgcccgatcgtgcgc
atcgtcgacggcaagggcaacgacctgaccatcccgggcaccgatctgccggcgcagtac
ctgctgccgccgcgctcgatcgtcaacctgcaggacggtgcggcggtgggcgtgggcgac
gtggtcgccaagatcccgcaggaagcatccaagacccgcgacatcaccggtggtctgccg
cgcgtggccgatctgttcgaagcgcgcaagccgaaggatccggcgatcctggccgagcgc
tcgggcatcatcagcttcggcaaggacaccaagggcaagcagcgcctgatcatcaaggac
accgatggttcggaacacgaagagctgatcccgaagtatcgccagatcatcgtgttcgaa
ggcgagcacgtggccaagggcgagaccgtggtcgacggcgagccgagcccgcaggacatc
ctgcgcctgctcggcgtggagccgctggccgcctacctggtcaaggaaatccaggacgtg
tatcgcctgcagggcgtgaagatcaacgacaagcacatcgaggtcatcacccggcagatg
ctgcgcaaggtcgagatcaccgaccagggcaacagcaagttcctcaacggcgagcaggcc
gagcgccagcgcgtcatcgaggaaaatgcccgcctggtgccccgcaacgaactgccggcc
aagtacgacccggtgctgctgggcatcaccaaggcctcgctggccaccgagtcgttcatc
tcggcagcgtcgttccaggagaccacccgcgtcctcaccgaggcggcggtccgcggcacc
agcgacacgctgcgcggcctgaaggaaaacgtgatcgtcggccgcctgatcccggccggc
accggcctggcctaccacgcccagcgtcgccgtggcgcgtccggcctgaccgagtcggag
atgcagaccctgtccggcggcaacgccgaggcggcggtagaaacgcccgcaccggcggct
gccagcagcgaagagtga
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integrated database retrieval system
