Xanthomonas sp. GW: HEP73_03959
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Entry
HEP73_03959 CDS
T08755
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
xag
Xanthomonas sp. GW
Pathway
xag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP73_03959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xag03019
]
HEP73_03959
Messenger RNA biogenesis [BR:
xag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HEP73_03959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QNH23010
LinkDB
All DBs
Position
complement(4645346..4645957)
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AA seq
203 aa
AA seq
DB search
MIDPDGYRPNVGIVLMRPDGQVFWARRVRRDGWQFPQGGMNTDETPVEAMYRELREETGL
LPEHVEVLGATPGWLRYRLPSRAIRRNERQVCIGQKQVWFLLRMQCDESELNLELTETPE
FDHWRWVDFWYPVEHVVLFKRGVYARALRHLAPLAQSIAGPGIRAMPTLAQEAWMPGNNA
GHERPRKRPRKRGGPLVARINND
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatccggacggttatcgaccgaacgtgggcatcgtgctgatgcggccggacggt
caggtgttctgggcacgtcgcgtgcgccgggatggctggcagttcccgcaaggcggcatg
aataccgacgagaccccggtcgaggccatgtaccgcgagttgcgtgaagagaccgggctg
ttgcccgagcacgtcgaagtgctcggtgcgacgcctggctggctacgctatcggctgccc
agccgcgccatccgccgcaacgaacgccaggtgtgcatcggccagaaacaggtctggttc
ctgctgcgcatgcagtgcgacgagagcgaattgaacctggagctgaccgagaccccggaa
ttcgaccattggcgctgggtcgacttctggtatccggtggagcatgtggtgctgttcaag
cgcggcgtgtacgcccgcgcgctgcgccacctggcgccgttggcgcagagcatcgccggg
ccgggcatccgcgccatgccgaccctggcgcaggaagcgtggatgcccggcaacaacgcc
ggccacgagcgcccgcgcaagcggccgcgcaagcgcggcggtcccctggtcgcccgtatt
aataacgattaa
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