Xanthomonas sp. GW: HEP73_04405
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Entry
HEP73_04405 CDS
T08755
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xag
Xanthomonas sp. GW
Pathway
xag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP73_04405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xag03400
]
HEP73_04405
Enzymes [BR:
xag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HEP73_04405
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HEP73_04405
DNA repair and recombination proteins [BR:
xag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEP73_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR_2
DUF6011
Motif
Other DBs
NCBI-ProteinID:
QNH23452
UniProt:
A0A7G7T382
LinkDB
All DBs
Position
complement(5204264..5205076)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGLEPHLLGRRIHGVILRRPDLRWPIPPEVAQQLPGQRIDGIRRRAKYL
LMDTDAGSALLHLGMSGSLRVLPGDTPPRAHDHVDISLEDGRVLRFNDPRRFGCLLWQAP
GQVHPLLEELGPEPLSDEFDGDYLFRRSRGRSAPVKTFLMDQRIVVGVGNIYAAESLFQA
GISPLREAGEVSRARYARLAEAAKAILGYAIARGGTTLRDFISPDGAPGYFEQELAVYGR
EGEACKRCGRPLRHASIGQRASVWCGSCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccccgaagtagaaaccacccggcgcggcctggagccgcatctgctgggg
cggcgcatccacggcgtgatcctgcgccggccggacctgcgctggccgatcccgccggag
gtggcgcagcagttgccggggcagcgcatcgatggcatccgccgccgcgccaaatacctg
ctgatggacaccgacgccggcagcgcgctgctgcacctgggcatgtccggcagcctgcgc
gtgctgcccggggacacgccgccgcgggcgcacgatcacgtcgacatcagtctggaagac
gggcgcgtgctgcgcttcaacgatccgcgccgcttcggttgcctgctgtggcaggcgccg
gggcaggttcatccgttgctcgaggagctggggccggagccgctgtcggacgaattcgac
ggcgattacctgttccggcgcagccgtggccggagtgcgccggtaaagacgttcttgatg
gaccaacgcatcgtggtcggagtcgggaacatctatgccgccgaaagcctgttccaggca
ggaatcagtccgctgcgcgaggccggggaggtctcgcgggcacgctatgcacgcctggcc
gaggcggccaaggcgatcctcggctacgccatcgcccgcggcggcaccaccttgcgcgac
ttcatcagcccggacggggcgcccggctacttcgagcaggagctggcggtctacggccgc
gagggcgaggcctgcaaacgctgtgggcggccgctgcgccacgccagcatcggccagcgc
gccagcgtctggtgcgggagctgccagcgctga
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