Xanthomonas sp. SI: HEP75_00031
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Entry
HEP75_00031 CDS
T10656
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
xai Xanthomonas sp. SI
Brite
KEGG Orthology (KO) [BR:
xai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xai03000
]
HEP75_00031
Transcription factors [BR:
xai03000
]
Prokaryotic type
Helix-turn-helix
Other families
HEP75_00031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_lid_14
AAA_5
HTH_30
AAA_2
HTH_29
HTH_23
HTH_28
AAA
PAS_8
Xre-like-HTH
HTH_1
Mg_chelatase
HTH_psq
HTH_7
HTH_22
AAA_16
HTH_Tnp_ISL3
nSTAND3
PAS_9
ATPase
AAA_7
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
QNH10628
LinkDB
All DBs
Position
complement(29667..31607)
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AA seq
646 aa
AA seq
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MAQQQSQHQLGHARRIFFERGGAPVGQVPDTILQSWQRCQRLGLAAQGTPPIEPVSAPRL
RELREAHERLWRLARAELEGLAGDAAATGSIVLLTDEAGWILDAEGSPGFLDKAGRVALM
PGACWSETQVGTNAIGTAIVESRSVEVRGGEHYFAPHQILSCAAVPIFDPYGQLAGVLDI
SGDASVQHMHALGLARMAVASIEHRYFDDGIAECELLRVHHDPALLGTAREGLLAFRNGK
LVAANQAGLRLFGLERHDLGRAPYAALFEEPLSRLRQQGSVFDLQGRALHGRVDSIGDAR
PRRRSQQPPITVSAATRAQHGADAPLFDAAQELALERARRVLDAQLPVLVQGETGTGKEV
FARELHRRSARAGKPFVAVNCAALPEGLIEAELFGYEDGAFTGARKHGSPGLLRQADGGV
LFLDEIGDMPPALQPRLLRVLQERELLPLGGGKPVKLDFALICATHRDLDEAMAERRFRP
DLYYRIAHHSVQIPALSAHPDRHALVQELWARVGQGRRLTDAALATLSVYPWPGNLRQLV
ACLRTLVALSDAGAVVDVDALPAYLPGAARGMRAGGGDAVPGQGGAHGELSAVPARASAH
ATDLDSLALAAMRQALDACGGNVARAARQLGVSRSTLYRRLGLGVR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacagcaatcgcagcaccagctcggccacgctcgccggatcttcttcgagcgc
ggcggcgccccggtcggccaggtgcccgacaccatcctgcagtcgtggcagcgctgccag
cgcctaggcctggcggcgcagggcacgccgccgatcgagccggtcagcgcgccgcgcctg
cgcgaactgcgcgaggcgcacgagcgcctgtggcggctggcccgcgccgaactggaaggc
ctggccggcgatgccgccgccaccggcagcatcgtgctgctgaccgacgaggccggctgg
atcctcgacgccgaaggcagcccgggcttcctcgacaaggccgggcgcgtggcgctgatg
ccgggcgcatgctggagcgagacccaggtcggcaccaatgcgatcggcaccgccatcgtc
gagagccgctcggtggaagtgcgtggcggcgagcattacttcgcgccgcaccagatcctc
agctgcgccgcggtgccgatcttcgatccctacggccagttggccggcgtgctggacatt
tccggcgacgccagcgtgcagcacatgcacgcgctgggcctggcgcggatggccgtggcc
agcatcgagcaccgctatttcgacgacggtatcgccgagtgcgaactgctgcgcgtgcac
cacgatccggcgctgctcggcaccgcgcgcgaaggcctgctcgcgttccgcaacggcaag
ctggtcgcggccaaccaggccggcctgcgcctgttcgggctggagcggcacgacctgggc
cgcgcgccgtacgcggccttgttcgaagagccgctgtcgcggctgcgccagcagggcagc
gtgttcgacctgcagggccgcgccctgcatgggcgtgtcgacagcatcggcgacgcgcgg
ccgcggcggcgttcgcagcagccgccgatcaccgtgtccgcggccacgcgcgcgcagcac
ggcgccgatgcgccgctgttcgatgccgcacaggaactggcgctggaacgcgcgcgacgc
gtgctcgatgcgcaattgccggtgctggtgcagggcgagaccggcaccggcaaggaagtg
ttcgcgcgcgaactgcatcggcgcagcgcgcgcgccggcaagccgttcgtcgcggtcaac
tgcgcggcgctgccggaaggcctgatcgaagccgaactgttcggctacgaagacggcgcc
ttcaccggcgcgcgcaaacacggcagcccgggcctgctgcgccaggccgacggcggcgtg
ctgttcctggacgaaatcggcgacatgccgccggcgctgcagccgcggctgctgcgcgtc
ctgcaggaacgcgagctgctgccgctgggcggcggcaagccggtgaagctggatttcgcg
ctgatctgcgccacccatcgcgacctggacgaggcgatggccgagcggcgtttccgtccc
gacctgtattaccgcatcgcccatcacagcgtgcagattccggcgctgagcgcgcatccg
gatcggcatgccttggtacaggaattgtgggcgcgggtagggcagggccggcgcctgacc
gacgcggcgctggccacgctgagcgtctatccgtggccgggcaacctgcgccaactggtg
gcctgtctgcgtacgctggtcgcgctgagcgacgctggcgccgtggtggacgtcgatgca
ttgccggcctatttgccaggcgcggcgcgcggcatgcgcgcgggcggcggcgatgcggtg
ccagggcagggcggagcgcacggcgaactgtctgcggtgcctgcgcgcgcctctgcgcac
gcgactgatctggacagcctcgccctggcggcgatgcgccaggcgctggatgcctgcggc
ggcaacgtcgcccgcgccgcgcgccagctcggcgtcagccgcagcacgctgtaccgccgg
ctcggactcggcgtgcgttga
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