Xanthomonas sp. SI: HEP75_00196
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Entry
HEP75_00196 CDS
T10656
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xai Xanthomonas sp. SI
Brite
KEGG Orthology (KO) [BR:
xai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xai03032
]
HEP75_00196
03400 DNA repair and recombination proteins [BR:
xai03400
]
HEP75_00196
Enzymes [BR:
xai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HEP75_00196
DNA replication proteins [BR:
xai03032
]
Prokaryotic type
DNA Topoisomerases
HEP75_00196
DNA repair and recombination proteins [BR:
xai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEP75_00196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QNH10787
LinkDB
All DBs
Position
222992..224206
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AA seq
404 aa
AA seq
DB search
MSNASRTTAATEAARALQARQAASSAGLVYVSDEEPGIVRRRAGTGFSYRLPDGRPVRDA
QTLQRIRQLAIPPAYTEVWICTKPNGHVQATGRDARRRKQYRYHADWAQVRGDGKFERIM
AFGQALPRLRRRLRRDLALPGYPRDKVLAMVVALMSETLVRVGNAEYARSNRSYGLTTLR
NRHLEFVKGGRARLKFRGKGGQEHDIEIDDARLVKLIRGCQQLPGQALFQYRDDDGQLQP
VDSGEVNDYLREAMGESFTAKDFRTWGGTRAALQRLAQLPLPDPSSERALKLAQNAVIRE
VADALGNTPAVCRKAYIDPCVFDGWRGGELHGLCERVRGERQWDLATLKYLARARAATRK
AAKASGAKKTGSKAAGAKPAKSTVPRRAGGSVAAGNAARSRGRA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcgtcccgcaccaccgccgccaccgaggcggcccgcgcgctgcaggccagg
caggccgccagcagcgccggcctggtctatgtcagcgacgaagagcccggcatcgtccgc
cgccgcgccggcacgggtttcagctatcggctgccggacggccgcccggtgcgcgatgcg
cagaccctgcagcgcatccgccaactggcgatcccgccggcctataccgaggtgtggatc
tgcaccaagcccaacggccatgtgcaggccaccggccgcgatgcgcggcggcgcaagcag
taccgctaccacgcggactgggcgcaggtgcgcggcgacggcaagttcgaacggatcatg
gccttcggccaagccctgccgcggctgcgccggcgcctgcgccgcgacctggcgctgccc
ggctacccgcgcgacaaggtgctggcgatggtggtggcgctgatgtccgagaccctggtc
cgcgtcggcaacgccgaatacgcgcgcagcaaccgttcctacggcctgaccacgctgcgc
aaccggcacttggaattcgtcaagggcggccgcgcgcggctgaagttccgcggcaagggc
gggcaggagcacgacatcgagatcgacgacgcgcgcctggtcaagctgatccgcggttgc
cagcaattgcccgggcaggcgctgttccagtaccgcgacgacgacggccaactgcagccg
gtggattcgggcgaggtcaacgactacctgcgcgaggcgatgggcgagagcttcaccgcc
aaggatttccgcacctggggcggcacccgcgccgcgctgcagcggctggcgcagctgccc
ttgcccgaccccagcagcgagcgtgcgctgaagctggcgcagaacgcggtgatccgcgag
gtggccgacgcgctgggcaataccccggcggtatgccgcaaggcctatatcgacccttgc
gtgttcgacggttggcgcggcggcgaattgcacggcctgtgcgagcgcgtgcgcggcgag
cggcagtgggacctggccacgctgaagtacctggcgcgggcgcgcgcggcgacccgcaag
gcggccaaagcctctggggccaagaagacgggctccaaggcggccggtgccaagccggcg
aagtccacggtgccgcgtcgcgccggcggcagtgttgcggccgggaacgctgcgcgttca
cgcggccgcgcctga
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