Xanthomonas sp. SI: HEP75_00576
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Entry
HEP75_00576 CDS
T10656
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xai Xanthomonas sp. SI
Brite
KEGG Orthology (KO) [BR:
xai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xai03032
]
HEP75_00576
03400 DNA repair and recombination proteins [BR:
xai03400
]
HEP75_00576
Enzymes [BR:
xai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HEP75_00576
DNA replication proteins [BR:
xai03032
]
Prokaryotic type
DNA Topoisomerases
HEP75_00576
DNA repair and recombination proteins [BR:
xai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEP75_00576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
PGM_PMM_IV
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QNH11158
LinkDB
All DBs
Position
complement(665720..668206)
Genome browser
AA seq
828 aa
AA seq
DB search
MSKHLLIVESPAKAKTINKYLGKDFHVLASYGHVRDLIPKEGAVDPDDGFAMRYALIEKN
EKHVEAIAKAAKVAEDIYLATDPDREGEAISWHIAEILKERGLLKDKPLHRVVFTEITPR
AIKEAMANPRQIAVDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWSIGADCLHPAQPFAAKLVKLDGQKFEQFTITDGDTAEAARMRLQK
AAQGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTSRTMRVAQKLYEGVTLGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDFGTGALPDKPNMYQTKSKNAQEAHEAIRP
TAALRTPAQMAKYLDDDGRRLYELIWKRAVACQMVPATMNTVTVELAAGNEHSFRASGTT
VIDPGFLAVYEEGKDQKAAEDEDEGRKLPAMKPGDRIPLDRIHADQHFTEPPPRYSEASL
VKTLEEYGIGRPSTYASIIQTLLFRKYVELDARRFRPSDVGRAVSKFLSGHFTRYVDYDF
TAKLEDELDAVSRGEEEWRPLMEKFWGPFKELVEEKKESVDRSEATGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEDKPKFASLRPGQSMHTITLEDALELFLMPRALGEDKGE
DVSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEYDGSDI
QVLNGRFGPYISDGKLNGKIPKDREPATLTLEEVQKLLEETGKPARRGFGAKKAAAKKEA
APKKSAAKKAAADAPAKPAAKKAVKKAAKKTAKKAAKKVVKKAGAKPA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggacttccacgtcctggcctcgtatgggcacgtgcgcgacctgatcccgaaa
gagggcgcggtggatccggacgacggcttcgcgatgcgctacgcgctgatcgagaagaac
gagaagcacgtcgaggccatcgccaaggccgccaaggtcgccgaagacatctatctggcg
accgacccggatcgcgagggcgaggcgatcagctggcacatcgcggagatcctcaaagag
cgcgggctgctcaaggacaagccgctgcaccgggtggtgttcaccgaaatcactccgcgc
gcgatcaaagaggcgatggccaacccgcggcagatcgccgtggacctggtcgatgcgcag
caggcgcggcgcgcgctggactatctggtcggtttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgccggccgcgtgcagtcgccggcgctgcgcatgatcgtc
gagcgcgaggaagagatcgaagccttcgtcgcccgcgaatactggagcatcggcgccgac
tgcctgcaccccgcgcagccgttcgcggccaagctggtcaagctcgacgggcagaagttc
gagcagttcaccatcaccgacggcgacaccgccgaagcggcgcggatgcgcctgcagaag
gccgcgcagggcgcgctgcacgtcaccgacgtggccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacgtccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
accagtcgcaccatgcgcgtggcgcagaagctgtacgaaggcgtgaccctgggcgacgag
ggcacggtcggcctgatcagctacatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggccgagatccgcgacgtgatcgcgcgcgacttcggcaccggcgcgctgccggacaag
ccgaacatgtaccagaccaagtccaagaatgcgcaggaagcgcacgaagcgatccgtccg
accgctgcactgcgcacgccagcgcaaatggccaagtacctggacgacgacggccgccgc
ctgtacgaactgatctggaagcgcgcggtggcctgccagatggtgccggcgacgatgaac
accgtcaccgtggaactggctgcgggcaacgagcacagcttccgcgccagcggcaccacg
gtgatcgacccgggctttttggccgtgtacgaagaaggcaaggaccagaaggccgccgag
gacgaggacgagggccgcaagctgccggcgatgaaacccggcgaccgcatcccgctcgac
cgcatccatgccgaccagcatttcaccgagccgccgccgcgctactcggaagcctcgctg
gtcaagaccctcgaggaatacggtatcggccgtccgtcgacctatgcctcgatcatccag
accctgctgttccgcaagtacgtggagctggacgcgcgccgtttccgcccctccgacgtg
ggccgcgcggtcagcaagttcctgtcaggccacttcacccgctacgtcgactacgacttc
accgccaagcttgaggacgagctggacgcggtgtcgcgcggcgaagaggaatggcggccg
ctgatggagaagttctggggtccgttcaaggaactggtcgaggagaagaaggaatcggtg
gaccgctccgaggccaccggcgcgcgcgaactcggcaccgaccccaagaccggcaagccg
gtcagcgtgcgcctgggccggttcgggccgtacgcggcgatcggcagcaccgccgaggac
gccgaggacaagcccaagttcgcctcgctgcggccgggccagagcatgcacaccatcacc
ctggaagacgcgctggagctgttcctgatgccgcgcgcgctgggcgaggacaagggcgag
gacgtcagcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcgtctatgcc
tcgctgaagaaggaagacgatccgtacaccatcgatctggcgcgcgcggtgttcctgatc
gaagagaaggaagagatcgcgcgcaaccgcatcatcaaggaatacgacggcagcgacatc
caggtgctcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatc
cccaaggaccgcgagccggccacgctgaccctggaagaagtgcagaagctgctggaagag
accggcaagccggcacggcgcggcttcggcgcgaagaaggccgcggcgaagaaggaagcc
gcgccgaagaagagcgcagccaagaaggccgcggccgacgccccggccaagcccgcggcg
aagaaggcggtcaagaaggccgcgaagaagaccgcaaagaaagcggccaagaaagtggtc
aagaaggccggggccaagcccgcctga
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