Xanthomonas sp. SI: HEP75_01066
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Entry
HEP75_01066 CDS
T10656
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xai Xanthomonas sp. SI
Pathway
xai02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HEP75_01066
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xai02022
]
HEP75_01066
02035 Bacterial motility proteins [BR:
xai02035
]
HEP75_01066
Two-component system [BR:
xai02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HEP75_01066
Bacterial motility proteins [BR:
xai02035
]
Pilus system
Twitching motility proteins
HEP75_01066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA_19
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QNH11645
LinkDB
All DBs
Position
complement(1277729..1279117)
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AA seq
462 aa
AA seq
DB search
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIARHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDIHVLRGLVRHAL
ELNNSERAAPPAPPPEQASRLLGASAAMDVLRATIAKVARSQAPVYILGESGVGKELVAR
TIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADQAGLFQAAHGGTLFLD
EVAELPLPMQVKLLRAIQEKSVRPVGASIEVPTDVRILSATHKDLADLVADGRFRHDLYY
RINVIELRVPPLRDRGGDLPQLAAAILARLAKSHGRVTPLLSPSALDALNRYAFPGNVRE
LENILERALAMAEDDQISAADLHLPQPGNSARAAAEAAPALPPGVVDIDPTSSALPSYIE
QLERAAIQKALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgaagcgccctggtcgtcgacgacgaacgcgacatccgcgagctgctg
gtgctgaccctgggcaggatggggctgcgcatcagcaccgccgccaacctcgccgaagcc
cgcgaactgctggccagcaatccctacgacctgtgcatcaccgacatgcgcctgcccgac
ggcaacggcatcgagctagtcagcgagatcgcccgccactacccgcgcacgccggtggcg
atgatcaccgccttcggcagcatggacctggcggtggaagcgctgaaggccggcgccttc
gacttcgtcagcaagccggtggacatccacgtgctgcgcggcctggtcaggcacgcgctg
gaactcaacaacagcgaacgcgccgcgccgccggcgccgccgccggaacaggccagccgc
ctgctcggcgcctcggcggcgatggacgtgctgcgcgccaccatcgccaaggtcgcgcgc
agccaggcgccggtctacatcctcggcgagtccggggtcggcaaggaactggtcgcacgt
accatccacgaacagggcgcgcgcgcggccgggccgttcgtgccggtcaactgcggcgcg
atcccggccgaactgatggaaagcgagttcttcggccacaagaaaggcagcttcaccggc
gcccatgccgaccaggccggtctgttccaggccgcgcacggcggcaccctgttcctggac
gaagtcgccgagctgccgctgccgatgcaggtcaagctgctgcgcgcgatccaggagaag
tcggtgcgcccggtcggtgcctcgatcgaagtgccgaccgacgtgcgcatcctctcggcc
acgcacaaggacctggccgacctggtcgccgacggccgcttccgccacgacctgtactac
cgcatcaacgtgatcgaactgcgcgtgccgccgctgcgcgaccgcggcggcgacctgccg
caactggccgcggcgatcctggcgcggctggccaagagccacggccgggtcaccccgctg
ctgtcgccgtcggcgctggacgcgctgaaccgctacgccttccccggcaacgtgcgcgaa
ctggagaacatcctcgagcgcgccctggcgatggccgaagacgaccagatcagcgccgcc
gatctgcacctgccgcagcccggcaacagcgcccgcgccgccgccgaagccgcccccgcg
ctgccgcccggcgtggtcgacatcgacccgacctcctccgccctgccctcctacatcgag
caactcgagcgcgccgcgatccagaaggcgctggaagagaaccgctggaacaagacccgc
accgcggcgcagctcggcatcacgtttcgtgcgctgcgctacaagctcaagaagttgggg
atggagtag
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