Xanthomonas sp. SI: HEP75_02170
Help
Entry
HEP75_02170 CDS
T10656
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xai Xanthomonas sp. SI
Pathway
xai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP75_02170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xai03019
]
HEP75_02170
Enzymes [BR:
xai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HEP75_02170
Messenger RNA biogenesis [BR:
xai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HEP75_02170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF3136
DUF6448
Motif
Other DBs
NCBI-ProteinID:
QNH12729
LinkDB
All DBs
Position
2657028..2658371
Genome browser
AA seq
447 aa
AA seq
DB search
MPFTLQLIPRDQHNVSRKDISPNALRVLYRLREAGFGAYLVGGAVRDLLVELQPKDFDVA
TDATPEQVKQLFRNCRLIGRRFRLAHVVYGREIIEVATFRANVDDGSGDRELDNGRLVRD
NVYGSIEDDAVRRDFTCNALYYAIEDFSVRDYTGGFADVQARLMRMIGDPEQRYREDPVR
MLRAVRLAAKLDFEIEPSTAEPIPRLAGLLAEAAPARLFEEVLKLFLSGDGVASFEGLER
YGLLAALFPESAAALNSNRSGALRRMLIEGLRNTDARVANDEPVSPAFLFALLLWPAYCR
ALMALQKQGMQLEEAQRRAADRVTLHQLSTVALPRRFSLPMQEIWLLQSRFTSRQKKRVV
RTLSHPRFRAAFDFLILRQSASAEHEADIAYWRELQQQPGYAPPPRGFDPEVDYVGDEVA
MAPADSEETPKRRRRRRRRPDAAAPAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttcaccctgcagctgatcccgcgcgatcagcacaacgtctcgcgcaaggacatc
agtcccaatgcgttgcgcgtgctgtaccggctgcgcgaagccggcttcggcgcgtacctg
gtcggcggcgcggtccgcgacctgttggtcgagctgcagcccaaggacttcgacgtcgcc
accgacgccactcccgagcaggtcaagcagctgttccgcaactgccgcctcatcggccgc
cgcttccgcctggcgcacgtggtgtacggccgcgagatcatcgaagtggccacgttccgc
gccaacgtcgacgacggcagcggcgaccgcgagctcgacaacggccgcctggtccgcgac
aacgtctacggcagcatcgaggacgacgcggtacgccgcgacttcacctgcaacgcgctg
tactacgcgatcgaggatttctcggtacgcgactacaccggcggtttcgccgacgtgcag
gcgcggctgatgcgcatgatcggcgaccccgagcagcgctaccgcgaagacccggtgcgc
atgctgcgcgcggtgcgcctggccgccaagctggacttcgagatcgagccgagcaccgcc
gagccgatcccgcgcctggctgggctgctggccgaagcggcgccggcacggctgttcgag
gaagtgctgaagctgttcctgtccggcgacggcgtggccagcttcgaaggcctggagcgt
tacggcctgctcgccgcgctgttcccggagagcgcagcggcgctgaattccaaccgcagc
ggcgcgctgcggcggatgctgatcgaaggcctgcgcaacaccgatgcgcgcgtggccaac
gacgagccggtgtcgccggcgttcctgttcgcgctgctgctgtggccggcctactgccgc
gcgctgatggcgttgcagaagcagggcatgcagctggaggaggcgcagcgccgcgccgcc
gaccgggtgaccctgcaccagctgagcacggtcgcgctgccgcggcgcttctcgctgccg
atgcaggaaatctggctgctgcagtcgcgcttcacctcgcgccagaagaagcgggtggtg
cgcacgctgtcgcatccacgtttccgcgccgcattcgatttcctgatcctgcgccagtcg
gcctcggccgagcacgaggccgacatcgcctattggcgcgaattgcagcagcagcccggc
tacgcgccgccgccgcgcggcttcgacccggaggtcgactacgtcggcgacgaggtggcg
atggccccggccgacagcgaggaaacccccaagcgccgccggcgccggcgccggcgtccg
gatgccgccgcaccggccgagtga
DBGET
integrated database retrieval system
