Xanthomonas sp. SI: HEP75_02606
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Entry
HEP75_02606 CDS
T10656
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
xai Xanthomonas sp. SI
Pathway
xai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HEP75_02606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xai03400
]
HEP75_02606
Enzymes [BR:
xai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
HEP75_02606
DNA repair and recombination proteins [BR:
xai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HEP75_02606
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEP75_02606
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEP75_02606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QNH13158
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All DBs
Position
3177886..3179325
Genome browser
AA seq
479 aa
AA seq
DB search
MPDSFLFYDLETFGADPRRTRIAQFAAVRTDAALNVVEEPVSFFVQPADDLLPSPIATLI
TGITPQQALRDGVNEADAFARIAEQMARPQTCTLGYNSLRFDDEFVRHGLFRNFHDPYER
EWRGGNSRWDLLDMLRLMHALRPDGVVWPQRDDGATSFKLEQLALANGVRDGDAHEALSD
VYATIGMARLFRERQPRLWDYALKLRDKRFCGGLLDVVAMQPVLHVSMRYPAARLCAAPV
LPLARHPRIDSRVLVFDLEGDVEPLLRYTPEQIADRLYTPQADLPEGEQRIPLKEVHLNK
APALVAWSHLRDPDFARLQLDPAQILAKAARLREAGPELAEKVRRVFGNERASAPADVDA
SLYDGFLADTDKRAMAQVRATPPAQLAPLEAGFRDPRLPELLFRYRARNWPQTLSIAEQS
RWDDYRRQRLHGDSGLAELGFDGYYAQLADLRLAHSDDATKQALLDQLAAWGQDLQRTL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacagctttctcttctacgacctggaaaccttcggtgccgatccgcggcgcacg
cgcatcgcccagttcgcggcggtgcgtaccgatgcggcgctgaacgtggtcgaggagccg
gtaagcttcttcgtgcagccggccgacgacctgctgccttcgccgatcgccacgttgatc
accggcatcaccccgcagcaggcgctgcgcgacggggtcaacgaggccgatgcgttcgcg
cgcatcgccgagcagatggcgcggccgcagacctgcacgctgggctacaactcgctgcgc
ttcgacgacgagttcgtgcgccacggcctgttccgcaatttccacgatccgtacgagcgc
gagtggcgcggcggcaattcgcgctgggacctgctggacatgctgcggctgatgcacgcg
ctgcgcccggacggcgtggtctggccgcagcgcgacgacggcgccacctcgttcaagctg
gagcagctggcgctggccaacggcgtgcgcgacggcgacgcgcacgaggcgctgtccgac
gtctacgccaccatcggcatggcgcggctgttccgcgagcggcagccgcggctgtgggac
tacgcgctgaaactgcgcgacaagcgcttctgcggcggcctgctcgacgtggtggcgatg
cagccggtgctgcacgtgtcgatgcgctatccggccgcacgcctgtgcgcggcgccggtg
ctgccgctggcgcggcatccgcggatcgacagccgggtgctggtgttcgacctggaaggc
gatgtcgagccgctgctgcgctacaccccggagcagatcgccgaccgcctgtacacgccg
caggccgacctgcccgagggcgagcagcgcattccgttgaaggaagtgcatctgaacaag
gcgccggcgctggtcgcctggtcgcatctgcgcgatccggatttcgcccgcctgcagctc
gacccggcgcagatcctggccaaggccgcgcgcctgcgcgaggccgggccggagttggcc
gaaaaggttcgccgcgtgttcggcaacgagcgcgcatcggccccggccgacgtggacgcc
tcgctgtacgacggcttcctggccgacaccgacaagcgcgcgatggcgcaggtgcgcgcg
accccgccggcacagctggcgccgctggaagccggcttccgcgatccgcgcctgcccgaa
ctgctgttccgctaccgcgcgcgcaactggccgcagacgctgtccatcgccgaacagagc
cgctgggacgactaccggcgccagcgcctgcacggcgacagcggcctggcggaactgggc
ttcgacggctactacgcgcagctcgccgatttacgtctggctcactccgatgatgctacc
aagcaagccctgctcgatcagctggccgcttggggccaggacctgcaacgcaccctatga
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