Xanthomonas sp. SI: HEP75_02813
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Entry
HEP75_02813 CDS
T10656
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xai Xanthomonas sp. SI
Brite
KEGG Orthology (KO) [BR:
xai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xai03016
]
HEP75_02813
Enzymes [BR:
xai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HEP75_02813
Transfer RNA biogenesis [BR:
xai03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HEP75_02813
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Acb1
Motif
Other DBs
NCBI-ProteinID:
QNH13362
LinkDB
All DBs
Position
complement(3425981..3426622)
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AA seq
213 aa
AA seq
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MAHDPSSANAQFSLGFAAPAPRESLFFAVLPDPATAQRAFALGERLRAEHGLRGRALPVE
RLHLTLHYLGEYAGIPPRLLQQAHAAGQALAAAPFDLCFDRVASFGGRARTRPLVLLGDG
EPPALRHLREALQQQLGRQGVATRADPAYVPHITLSYDEQTVPPQAVPELRCPVAALSLI
RSVQGQGRYVHEATWPLSADAAGPASAGGEAIR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgatccttcttccgcaaacgcgcagttctcgctcggcttcgcggcgccggcg
ccgcgcgagagcctgttcttcgccgtgctgccggacccggccaccgcgcagcgcgccttc
gcactgggcgagcgcctgcgtgccgagcatggcctgcgcggtcgcgcgctgccggtggaa
cgtctgcacctgaccttgcattacctcggcgagtacgccggcattccgccgcggctgctg
cagcaggcgcatgccgccggacaggcattggcggcggcgccgttcgacctgtgtttcgat
cgggtcgccagcttcggcggccgcgcccgcacgcggccgctggtgttgcttggcgacggc
gagccgcccgcgttgcgccacctgcgcgaggccctgcagcagcaactcgggcgccagggc
gtggcaacgcgcgccgacccggcctatgtcccgcatatcaccctgagctacgacgagcag
acggtgccgccgcaagccgtgccggaactgcgctgcccggtcgccgcgctgagcctgatc
cgtagcgtgcaagggcaggggcgctatgtgcacgaggcgacctggccgctgtcggcggat
gcggccgggcctgcgtccgccggcggcgaggcgatccgatga
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