Xanthomonas sp. SI: HEP75_03285
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Entry
HEP75_03285 CDS
T10656
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
xai Xanthomonas sp. SI
Pathway
xai03020
RNA polymerase
Brite
Enzymes [BR:
xai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HEP75_03285
Transcription machinery [BR:
xai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HEP75_03285
DNA repair and recombination proteins [BR:
xai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HEP75_03285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QNH13822
LinkDB
All DBs
Position
complement(3964483..3968700)
Genome browser
AA seq
1405 aa
AA seq
DB search
MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSFGEVKKPETINYRTFKPERDGLFCAA
IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTALERRQLLTEEQFLTARQEHGDDFDAAM
GAEAVYELLRTIDLQSEMTRLREEIAGTGSETKLKRLTKRIKLVEAFLESGNRPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHECGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANIAEVKRAYDNR
VVELHAKVKVRITETVIDEDGSRSKKTSIVDTTIGRALLAEILPDGLPFALANTELTKKN
ISRLINSSYRQLGLKDSVVFADKLMYTGFAYATRAGVSIGIDDMLIPSEKKGILGEAEQE
VLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAMMDTIGTEKVTNAKGEIIDQKSMN
SLYIMADSGARGSQAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVQEYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEPDCGTSDGLTMTPIVEGGDVVEPLKDRVL
GRVVAEDVFLPGNDEDPIVTRNTLLDEQWVAKLEEAGVQTLKVRSTITCESSFGVCARCY
GRDLARGHLVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNITVKTTGSIK
FNNLKSVEHANGSLVAVSRSGELSVLDGHGRERERYKLAYGATITAKDGDAVKAGQSVAN
WDPHNHPIVSEVAGFIRFIDFIDGVTVIEKTDDLTGLASREITDPKRRGAQAKDLRPIVR
IVDGKGNDLTIPGTDLPAQYLLPPRSIVNLQDGAAVGVGDVVAKIPQEASKTRDITGGLP
RVADLFEARKPKDPAILAERSGIISFGKDTKGKQRLIIKDTDGSEHEELIPKYRQIIVFE
GEHVAKGETVVDGEPSPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEVITRQM
LRKVEITDQGNSKFLNGEQAERQRVIEENARLVPRNELPAKYDPVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTSDTLRGLKENVIVGRLIPAGTGLAYHAQRRRGASGLTESE
MQTLSGGNAEAAVETPAPAAASSEE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgctcaacctcttcaaccagcagcgccagacgctggacttcgacgcgatc
aagatcgcgttggcctcgccggacctgatccgttcgtggtccttcggcgaagtgaagaag
ccggaaacgatcaactaccgtaccttcaagcccgagcgcgacggcctgttctgcgccgcg
atcttcggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgtggcgtggtctgcgagaagtgcggcaccgaagtgaccctggccaaggtgcgccgcgag
cgcatgggccacatcgacctggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgcatcggcctgatgctggacatgaccctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctatgtggtgaccgagccgggcctgaccgccctggagcgccgccagctgctg
accgaagagcagttcctgaccgcgcgccaggagcacggcgacgacttcgacgccgcgatg
ggcgccgaggcggtgtacgagctgctgcgcacgatcgacctgcagtcggaaatgacccgc
ctgcgcgaagagatcgccggcaccgggtcggaaaccaagctcaagcgtctgaccaagcgc
atcaagctggtcgaagccttcctcgagtcgggcaaccgtccggagtggatggtgatgacc
gtgctgccggtgctgccgccggatctgcgcccgctggtgccgctggacggcggccgcttc
gcgacctccgatctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgactgcgt
cgcctgctcgagctcaatgcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaatcggtggatgcgctgctggacaacggccgtcgcggccgtgccatcaccggcacgaac
aagaggcctttgaagtcgctggccgacatgatcaagggcaagcagggccggttccgccag
aacctgctcggcaagcgcgtggactactccggccgttcggtcatcgtggtcggcccgacc
ctgcgcctgcacgagtgcggcctgccgaagaagatggcgctggagctgttcaagccgttc
gtgttcgccaagctgcagcgtcgcggcctggccaccaccatcaaggccgccaagaagctg
gtcgagcgcgaagaagccgaagtctgggacatcctggaagaggtcatccgcgagcacccg
gtgctgctgaaccgtgcgccgaccctgcaccgcctgggtatccaggcgttcgagccggtg
ctgatcgaaggcaaggcgatccagctgcatccgctggtgtgtaccgcgttcaacgccgac
ttcgacggcgaccagatggccgtgcacgtgccgctgtcgctggaagcgcagctggaagcg
cgcgcgctgatgatgtccaccaacaacatcctgtcgccggccaacggcgagccgatcatc
gtgccgtcgcaggacgtggtgctgggcctgtactacatgagccgcgccctggagaacaag
aagggcgagggcatggtgttcgccaacatcgccgaagtgaagcgcgcctacgacaaccgc
gtcgtcgaactgcacgccaaggtcaaggttcgcatcaccgagacggtgatcgacgaggac
ggcagccgcagcaagaagacctcgatcgtggacaccacgatcgggcgcgcgctgctggcc
gaaatcctgccggacggcctgccgttcgcgctggccaacaccgagctgaccaagaagaac
atcagccgcctgatcaactccagctaccgccagctgggtctgaaggacagcgtcgtgttc
gccgacaagctgatgtacaccggcttcgcctacgcgacccgcgccggcgtgtcgatcggc
atcgacgacatgctgatcccgtcggagaagaagggcatcctcggcgaagccgagcaggaa
gtgctggaaatccaggagcagtaccagtccggtctggtcaccgccggcgagcgctacaac
aaggtcgtggacatctggtcgcgcaccaacgagcgcatcgccaaggcgatgatggacacc
atcggtaccgagaaggtcaccaatgccaagggcgagatcatcgaccagaagtcgatgaac
tccctttacatcatggccgactccggtgcgcgtggtagccaggcgcagatccgtcagctg
gccggtatgcgcggcctgatggcgcgtccggacggctcgatcatcgagaccccgatcaag
gccaacttccgcgaaggcctgaacgtgcaggagtacttcaactccacccacggcgcgcgt
aagggtctggccgataccgcgctgaagaccgccaactcgggttacctgacccggcgtctg
gtcgacgtggcgcaggacgtggtcatcaccgaaccggattgcggcaccagcgacggcctg
accatgaccccgatcgtggaaggcggcgacgtggtcgagccgttgaaggatcgcgtgctc
ggtcgcgtggtggccgaggacgtgttcctgccgggcaacgacgaggatccgatcgtcacc
cgcaacacgctgctcgacgagcagtgggtggccaagctggaagaggccggcgtgcagacg
ctgaaggtgcgctccacgatcacctgcgaatcctcgttcggcgtgtgcgcccgctgctac
ggccgcgacctggcgcgcggtcacctggtcaacatcggcgaagcggtcggcgtcatcgcc
gcgcagtcgatcggcgagccgggtacccagctgaccatgcgtaccttccacatcggcggc
gcagcttcgcgtgcggcggcggtggacaacatcacggtcaagaccaccggttcgatcaag
ttcaacaacctcaagtcggtcgagcacgccaacggttcgctggtggcggtgtcgcgttcg
ggcgaactgtccgtgctcgacggccacggccgcgagcgcgagcgctacaagctggcctac
ggcgccacgatcaccgcgaaggacggcgacgcggtcaaggccggccagtcggtcgccaac
tgggatccgcataaccacccgatcgtgtcggaagtggccggtttcatccgcttcatcgac
ttcatcgacggcgtcaccgtcatcgagaagaccgacgatctgaccggcctggcctcgcgc
gagatcaccgatccgaagcgtcgcggcgcccaggccaaggacctgcgcccgatcgtgcgc
atcgtcgacggcaagggcaacgacctgaccatcccgggcaccgatctgccggcgcagtac
ctgctgccgccgcgctcgatcgtcaacctgcaggacggtgcggcggtgggcgtgggcgac
gtggtcgccaagatcccgcaggaagcgtccaagacccgcgacatcaccggtggtctgccg
cgcgtggccgatctgttcgaagcgcgcaagccgaaggatcccgcgatcctggccgagcgc
tcgggcatcatcagcttcggcaaggacaccaagggcaagcagcgcctgatcatcaaggac
accgatggttcggaacacgaagagctgatcccgaagtatcgccagatcattgtgttcgaa
ggcgagcacgtggccaagggcgagaccgtggtcgacggcgagccgagcccgcaggacatc
ctgcgcctgctcggcgtggagccgctggccgcctacctggtcaaggaaatccaggacgtg
tatcgcctgcagggcgtgaagatcaacgacaagcacatcgaggtcatcacccggcagatg
ctgcgcaaggtcgagatcaccgaccagggcaacagcaagttcctcaacggcgagcaggcc
gagcgccagcgcgtcatcgaggaaaatgcccgcctggtgcctcgcaacgaactgccggcc
aagtacgacccggtgctgctgggcatcaccaaggcctcgctggccaccgagtcgttcatc
tcggcggcgtcgttccaggaaaccacccgcgtcctcaccgaggcggcggtccgcggcacc
agcgacacgctgcgcggcctgaaggaaaacgtgatcgtcggccgtctgatcccggccggc
accggcctggcctaccacgcccagcgtcgccgtggcgcgtccggcctgaccgagtcggag
atgcagaccctgtccggcggcaacgccgaggcggcggtcgaaacgcccgcaccggcggct
gccagcagcgaagagtga
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