Xanthomonas sp. SI: HEP75_04170
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Entry
HEP75_04170 CDS
T10656
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xai Xanthomonas sp. SI
Pathway
xai03030
DNA replication
xai03410
Base excision repair
xai03420
Nucleotide excision repair
xai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEP75_04170
03410 Base excision repair
HEP75_04170
03420 Nucleotide excision repair
HEP75_04170
03440 Homologous recombination
HEP75_04170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xai03032
]
HEP75_04170
03400 DNA repair and recombination proteins [BR:
xai03400
]
HEP75_04170
Enzymes [BR:
xai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEP75_04170
DNA replication proteins [BR:
xai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HEP75_04170
DNA repair and recombination proteins [BR:
xai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HEP75_04170
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEP75_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QNH14697
LinkDB
All DBs
Position
complement(4976213..4978981)
Genome browser
AA seq
922 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNPAGEPTGALFGVVNMLRATLKERPEYVAFVVDAPG
KTFRDDLYAQYKANRPPMPDELRAQVEPMCQIVHALGITILREGGVEADDVIGTLALQGA
GDGLDVTISTGDKDFAQLVRPGVQLVNTMSGSRMDSDAAVMEKFGVWPSQIVDLLALMGD
AIDNVPGVDKCGPKTAAKWLAEYGSLDGVMANADAIKGKIGENLRAALARLPLNRELVTI
KTDVALPGGPRTLALREQEPDLLRGLYQRYGFTQALRDLDGGVAAPAGAAEVTPSLRGTA
AGYARAAAPIDDTLDPALAAKGDYAAIMTPEQFEHLLQRLRAADGFAFDSETDALDAMRA
NLVGLSFAIEPGRADYLPLGHDYPGAPVQLDRSLALAALKPLLEDPAKPKVGQHGKYDLH
VLRRHGVDVRGYADDTMLESFVLNSTASRHDMDSLARRYLGYDTVKYEDVAGKGAKQIAF
SQVAIDDATGYAAEDADITLRLHRALSAQLDAEPALAKVYREIEMPLVPVLARIEANGVS
VDMAELRRQSQDLSQRMLAAQQKATALAGRTFNLDSPKQLQAVLFDELKLPALMKTPKGQ
PSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMINPDTGRVHTSYHQAGAAT
GRLSSADPNLQNIPIRTDDGRRIRRAFVAPSGRKLIACDYSQIELRIMAHLSEDPGLLRA
FGAGVDVHRATAAEVFGRKLEDVTNNERRAAKAINFGLMYGMSAFGLARNLGIGRGEAQD
YVALYFSRYPAVRDFMERMREQARTQGYVETLFGRRLYLNDINAKQQGLRAGAERAAINA
PMQGTAADIIKRAMVTVDAWLEQHRERALMILQVHDELVFEADADFVDTLLPEVTRLMAG
AAELKVPLVVDSGVGDNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccgattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
cccccgctgaccaaccccgccggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgcgtgccacgctgaaggagcgtcccgagtacgtcgccttcgtggtcgatgcgccgggc
aagaccttccgcgacgacctgtacgcacagtacaaggccaaccgcccgccgatgcccgac
gagctgcgcgcgcaggtcgagccgatgtgccagatcgtgcacgcgctgggcatcaccatc
ctgcgcgagggcggggtggaggccgacgacgtgatcggcaccctggccctgcagggcgcc
ggcgacggcctggacgtgaccatctccaccggcgacaaggacttcgcccagctggtgcgc
cccggcgtgcagctggtcaacaccatgagcggcagccgcatggactccgacgcggcggtg
atggagaagttcggcgtgtggccgagccagatcgtcgacctgctggcgctgatgggcgac
gccatcgacaacgtgccgggcgtggacaaatgcggccccaagaccgcggccaagtggctg
gccgaatacggctcgctggacggggtcatggccaatgccgatgcgatcaagggcaagatc
ggcgaaaacctgcgcgcggcgctggcgcggctgccgctgaaccgcgaactggtcacgatc
aagaccgacgtggcgctgcccggcggcccgcgcacgctggccctgcgcgagcaggagccg
gacctgctgcgcggcctgtaccagcgctacggcttcacccaggcgctgcgcgacctggac
ggcggcgtggccgccccggccggcgccgccgaggtcacccccagcctgcgcggcaccgcc
gccggctatgcccgcgccgcggcaccgatcgacgacaccctggacccggcgctggccgcc
aagggcgactacgccgcgatcatgaccccggagcagttcgaacacctgctgcagcgcctg
cgcgcggccgacggcttcgccttcgacagcgagaccgacgcactggacgcgatgcgcgcc
aacctggtcgggctcagcttcgcgatcgagcccggccgcgccgactacctgccgctgggc
cacgactaccccggcgcgccggtgcaactggaccggagcctggcgctggcggcgctgaag
cccctgctggaagacccggccaagcccaaggtcggccagcacggcaagtacgacctgcac
gtgctgcgccgccacggcgtggacgtacgcggctacgccgacgacaccatgctggagagc
ttcgtgctcaactccaccgccagccgccacgacatggattcgctggcgcggcgctacctg
ggctacgacacggtcaagtacgaggacgtggccggcaagggcgccaagcagatcgcgttc
tcgcaggtggccatcgacgacgccaccggctacgccgccgaggacgccgacatcaccctg
cgcctgcaccgcgcgctgtccgcgcagttggacgccgagccggcgctggccaaggtctac
cgcgagatcgaaatgccgctggtgccggtgctggcacggatcgaggccaacggcgtcagt
gtggacatggccgaactgcgcaggcagagccaggacctgagccagcgcatgctcgccgcg
cagcagaaggccaccgcgctggctgggcgcaccttcaacctggattcgcccaagcagctg
caggcggtgctgttcgacgaactgaagctgccggcgctgatgaagacccccaagggccag
cccagcaccaacgaagaggcgctggaggcgatcgccgaccagcacgaactgccgcgggtg
atcctggaataccgcggcctggccaagctgcgcagcacctacaccgacaagctgccggag
atgatcaatcctgacaccggccgcgtgcacaccagctaccaccaggccggcgccgccacc
gggcggctgtcctcggccgatccgaacctgcagaacatcccgatccgcaccgacgacggc
cgccgtatccgccgcgccttcgtcgccccgtcgggacgcaagctgatcgcctgcgattac
tcgcagatcgaactgcggatcatggcccacctgtccgaggacccgggcctgctgcgcgcc
ttcggcgccggcgtggacgtgcaccgcgccaccgccgccgaggtgttcggacgcaagctc
gaggacgtcaccaacaacgagcgccgcgccgccaaggcgatcaacttcggcctgatgtac
ggcatgagcgcgttcggcctggcccgcaacctgggcatcggccgcggcgaggcgcaggac
tacgtggcgctgtacttcagccgctacccggcggtgcgcgacttcatggagcgcatgcgc
gagcaggcgcgcacccagggctacgtggagaccctgttcggccgccgcctgtacctgaac
gacatcaacgccaagcagcagggcctgcgcgccggcgccgagcgcgcggcgatcaacgcg
ccgatgcagggcaccgccgcggacatcatcaagcgcgccatggtcaccgtggacgcctgg
ctggaacagcaccgcgagcgcgcgctgatgatcctgcaggtgcacgacgaactggtgttc
gaggccgatgccgacttcgtcgacaccctgctgcccgaggtgacccggctgatggccggc
gccgccgaactgaaggtgccgctggtggtggacagcggcgtcggcgacaactgggacgag
gcgcattag
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