Xylocopilactobacillus apis: KIMC2_08180
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Entry
KIMC2_08180 CDS
T09716
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xak
Xylocopilactobacillus apis
Brite
KEGG Orthology (KO) [BR:
xak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xak03016
]
KIMC2_08180 (truB)
Enzymes [BR:
xak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KIMC2_08180 (truB)
Transfer RNA biogenesis [BR:
xak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KIMC2_08180 (truB)
Prokaryotic type
KIMC2_08180 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BDR56256
UniProt:
A0AAU9CV37
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All DBs
Position
856352..857233
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AA seq
293 aa
AA seq
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MINGIIPVYKEAGKTSFFYVNQIKKIFHQKKVGHTGTLDPMVTGVLPICLGDATKLVPFL
MEKHKSYSCTILIGRATETEDLDGKEIAKIKVKDRISDLTIDDILETFKGENEQVPPFFS
AVRYHGKHLYEYARENIFIKKPARSFHILSINRTSSVKYHHDFTCEFKFEVVCSKGTYIR
TLCTQIGQKLGYPAVMKKLVRTSGGGFNLDQTVKLDQIKANLNVVKSLEEILFDLPKFDL
TDSQFLRVRNGAKIKIPVKEDLLVLKYSDRVVAIYEKKGSFFQAKTMFLENIK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgattaatggaataattcctgtgtataaagaagcagggaaaacgagttttttctatgtt
aatcaaatcaaaaagatttttcaccaaaaaaaggtcgggcatactggaactttggatcca
atggtaacaggagttttaccgatttgtttaggagatgctactaaattagttccctttttg
atggaaaaacataagtcttattcttgtacaattcttatcggacgagcaactgaaactgaa
gatttagatggaaaagaaattgcaaaaattaaagttaaagatcgaatttccgatttaaca
attgatgatattttagaaacatttaagggggagaacgaacaggttcctccctttttctct
gcagttcgttatcacggaaaacatttgtatgaatatgctagagaaaatatttttataaaa
aaaccagcacgttcatttcacattttaagtataaatcgaacttcatctgttaagtatcat
catgattttacttgtgaatttaaatttgaggtggtttgttctaaaggtacctatattaga
actctttgtactcaaattggccaaaagcttggatatcctgcggttatgaaaaaattggta
agaacttccggcggagggtttaatctggatcaaacggttaaattagatcaaataaaagct
aatctaaatgttgttaagtccttagaagaaattttatttgatttaccaaagtttgattta
acagattctcaatttttacgcgttcgaaacggtgcaaaaataaaaatacctgtaaaagaa
gatttacttgttttaaaatattcagatagagttgttgccatttatgaaaaaaaaggtagt
ttttttcaggctaagacaatgtttttggaaaatatcaaatga
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