Xylocopilactobacillus apis: KIMC2_09130
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Entry
KIMC2_09130 CDS
T09716
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
xak
Xylocopilactobacillus apis
Brite
KEGG Orthology (KO) [BR:
xak00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KIMC2_09130 (rnmV)
Enzymes [BR:
xak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
KIMC2_09130 (rnmV)
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Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BDR56351
UniProt:
A0AAU9D1J3
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All DBs
Position
960909..961478
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AA seq
189 aa
AA seq
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MINNKIRSVVVVEGKKDTQRLRLIDPNVRTIETRGAAVDKDIVALIKKVSKTEEVVVLTD
PDFSGERIRRIISQQVSGIKHAFLRQKDAIPGKESHHASLGVEHAPEKAIIRALNEVSRE
EKEKPKLINKLDLMKLKLLNSPEARIRREYISEKLNLGHVNGNHLAERLQLLGVSLSDLK
NILEKKDHE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgataaataataaaattaggtcggtagttgttgtagaagggaaaaaggatactcagcgg
ttacgattaatagatccaaatgttagaactattgaaacaagaggtgcagctgttgataaa
gatatcgtcgctttaataaaaaaagtaagtaagactgaagaagtggttgttttaacggat
ccagatttttctggtgaacgaattaggcggattatttcgcaacaagtttcaggaattaaa
catgcttttttaagacaaaaagatgcgattccgggaaaagagagtcatcatgcttcgctg
ggagttgaacatgcaccagaaaaagcaattattagagcacttaatgaagtatctcgtgaa
gaaaaagaaaagccgaaattaattaataaactagatttaatgaagttaaaattattgaat
tctcccgaagctagaattagaagagagtatatttcggaaaaattaaatttgggtcacgta
aatggtaatcatttagctgagagactgcagcttttaggagttagcttgtctgatctcaaa
aatattttagaaaagaaagatcatgaataa
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