Xylocopilactobacillus apis: KIMC2_10860
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Entry
KIMC2_10860 CDS
T09716
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xak
Xylocopilactobacillus apis
Brite
KEGG Orthology (KO) [BR:
xak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xak03032
]
KIMC2_10860 (topA)
03400 DNA repair and recombination proteins [BR:
xak03400
]
KIMC2_10860 (topA)
Enzymes [BR:
xak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KIMC2_10860 (topA)
DNA replication proteins [BR:
xak03032
]
Prokaryotic type
DNA Topoisomerases
KIMC2_10860 (topA)
DNA repair and recombination proteins [BR:
xak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KIMC2_10860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
BDR56524
UniProt:
A0AAU9DLQ7
LinkDB
All DBs
Position
complement(1140361..1142457)
Genome browser
AA seq
698 aa
AA seq
DB search
MVSSTKKRTTKKNLVIVESPTKAQTIERYLGRNYRVVASKGHIRDLPKSKMGVDIENSFK
PEYISIRGKGPVIKDLKKEAAKAKQVYLASDPDREGEAIAWHVSHILGLKETDKNRVVFN
EITKDTVKEAFKNPRQINMNLVDAQQARRVLDRIVGYSISPILWRKVKKGLSAGRVQSVA
LKLIIDRQNEIDKFVPEEYWTIEANFKKDRKTFIGEFYGVGGKKKKLSNDQDVKEVITKL
DKKKEFNVTDVKKRQTRKNPNPAFTTSTLQQVANRKLNFHTKKTMMLAQQLYEGVNLGGK
TGHAGLITYMRTDSVRVSPTAVEESHKFILDKYGKEYVGSRVAKNNKKEKVQDAHEAIRP
SSVLRTPQSLKDILSRDQLRLYTLIWDRFVASQMSAAVYDTMSTNVEQNDVQFQVKGSKL
VFPGFTKVYKDSDSKNDGELPDLKTGDKVTLSKLSPAQHFTQPPAKYTEASLVKALEENG
VGRPSTFSPIIDTLQKRYYVKLNAKRFEPTDLGKIVNNIIEEFFPEIVNIGFTADIETNL
DNVEQGINDWVSLVDKFYQKFEPEVDNADKKIEKIEFKFELVGDNCPECGAPLVYKMGRY
GKFIACSRFPDCRYTKAVVKEIGMTCPVCHEGEVIEKHTKRNRLFYGCSRYPKCEFMSWD
KPVPRNCPNCDHFLVEKKVKNTLQVVCPNGDYAEEVQK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggtaagttcaacaaaaaaaagaacaacaaaaaaaaatttagttatcgttgagtccccc
accaaagctcagacgattgaaagatatctaggaagaaattatcgagttgttgcatctaag
gggcatattcgagatttacccaaaagtaagatgggagtagatattgaaaatagttttaag
ccggaatatatttcgattcgaggtaaaggtcctgttattaaggatttaaaaaaagaagca
gcaaaggcaaaacaagtttatctggcttcagatccggatcgtgaaggtgaggcgatagct
tggcatgtaagccatattctgggtcttaaagaaactgataaaaatcgtgtggtatttaat
gaaataactaaggatacagttaaggaagcttttaaaaaccctcgtcaaatcaatatgaat
ttagttgatgctcagcaggcacgaagagttttagaccgcattgttggatattcaattagt
ccgattctttggcggaaagttaaaaaaggtctttcggctgggagagttcaatctgttgca
ctgaagttaattattgatcggcaaaatgagattgataaatttgtaccagaagaatattgg
acaattgaggctaattttaaaaaggaccgaaaaacttttattggtgaattttatggagtc
ggtggtaaaaagaaaaaattaagtaatgatcaagatgttaaagaggtcattacgaaactc
gataagaaaaaagagtttaatgttacggatgtaaaaaaaaggcagactaggaaaaatcct
aatccagcttttacaacatcaactttacagcaggttgcaaatcgtaaattaaattttcat
actaagaaaacgatgatgttagctcagcaattgtatgaaggagttaatttaggcggtaaa
actggtcatgctggtttgattacatatatgagaactgattccgtccgggtatctccaaca
gcggttgaagaatcacataaatttattttagataagtatggaaaagaatatgttggttca
cgagttgctaaaaataataaaaaagaaaaagttcaagacgctcatgaagccattcgtccg
agttcagttctaagaactcctcaatctttaaaagacattttgtcacgtgatcagctgcgt
ttatatacacttatttgggatcgctttgttgccagtcagatgtcagctgctgtttatgac
acaatgagtactaatgttgaacaaaatgatgttcaatttcaggtcaaaggttcaaaatta
gtttttccaggatttactaaagtttataaagatagtgattcaaaaaatgacggtgaatta
cctgatcttaaaaccggagacaaggtgacgttgagtaagttatctccggctcagcatttt
acccagccgcctgcaaaatatactgaagcaagtttagttaaagcattagaggaaaacggt
gttggtcgtccttcaactttttcaccaatcattgatactcttcaaaaaaggtattacgtc
aaattaaatgcaaaacgatttgaaccgacagatttagggaaaatcgttaataatattatt
gaggagttcttcccagaaatagtaaatattggtttcacagcagatattgagacaaatctt
gataatgttgaacagggaatcaacgactgggtttcattggtcgataaattttatcaaaag
tttgaaccagaagttgataatgccgataaaaaaattgagaaaattgagtttaagtttgaa
cttgtgggcgataattgtcctgaatgtggggcaccgttggtttataaaatgggtcgttac
ggtaagttcattgcctgcagcagatttcctgattgccgctacactaaagcagtagttaaa
gaaattggaatgacttgtccagtgtgtcatgaaggggaagttattgaaaaacatactaag
cgtaatcgtctgttttatggatgttcacgctatcctaaatgtgaatttatgtcctgggat
aagccagttccaagaaattgtcctaactgcgaccatttcttagtcgaaaagaaagtaaaa
aatacactacaagttgtatgtcctaacggagattatgcagaagaggtacaaaaataa
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