Xylocopilactobacillus apis: KIMC2_12260
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Entry
KIMC2_12260 CDS
T09716
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xak
Xylocopilactobacillus apis
Pathway
xak03030
DNA replication
xak03430
Mismatch repair
xak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIMC2_12260 (dnaX)
03430 Mismatch repair
KIMC2_12260 (dnaX)
03440 Homologous recombination
KIMC2_12260 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xak03032
]
KIMC2_12260 (dnaX)
03400 DNA repair and recombination proteins [BR:
xak03400
]
KIMC2_12260 (dnaX)
Enzymes [BR:
xak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIMC2_12260 (dnaX)
DNA replication proteins [BR:
xak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KIMC2_12260 (dnaX)
DNA repair and recombination proteins [BR:
xak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KIMC2_12260 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
DNA_pol3_gamma3
AAA_assoc_2
AAA_22
TIP49
AAA_5
RuvB_N
AAA_14
AAA_16
AAA_19
RCF1-5-like_lid
Rad17
PIF1
YlbD_coat
AAA_11
AAA_lid_RFC1
AAA_18
Mg_chelatase
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BDR56664
UniProt:
A0AAU9CZ19
LinkDB
All DBs
Position
complement(1293659..1295359)
Genome browser
AA seq
566 aa
AA seq
DB search
MSYQALYRKYRPVDFNGIVGQPVLVQTLKNAITTGHISHAYLFSGPRGTGKTTTARVFAK
AINCQFAKDGEPCNECETCLGINNGTLADYVEIDAASNNGVDEIRNIRSQIKYAPLVANY
KIYVIDEAHMLSLGAFNALLKTLEEPPSYAIFILATTNPQKIPATIISRLQKYNFHRLSN
EDLTNQLDFILKKENIEYDKSAIDSVAQLANGGMRDALSILDQAVTLSNGKITLDLVNEL
TGSTTKDLLFQYLKSIHDGDVKSAVEEIDQIIHEGKDLAQFIHEFIILIKDILLLKNNIN
PVSFTSEELEQFKEIPAAWFYQALKVLNDEDQRLKKTVYADLLIEIMTIELSDLTSIAKT
TSVQSEQPPKQVEQIPKITIKQPEKKVEFKPIEQQVEVAETKESDSSITGTFINYEGMDQ
VLKNATRQSLEQLNEKWEEVINEADGELAALIKYTHPVAASNDGAIISFKFLQFLQKLDQ
RSDLQADLQELTGNLKIMGISDEEWPEYRKNYIISLKQGKVKPEETNQEVNNEKESAVKE
DHSELTSNMEAIIKFLGPENVKIIDD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcaagctttatatcgaaaatatcgaccggttgattttaacggaattgttgga
cagccggtattagtacagactttaaaaaatgcgattacgacgggtcatatttctcatgcg
tatcttttttcaggcccgagggggactggaaaaactacaaccgcacgagtattcgctaaa
gcaattaactgccaatttgccaaagatggtgagccttgcaatgaatgtgagacttgctta
ggaattaataatggcactttagctgattacgtggaaattgatgctgcctcaaataacggg
gtcgatgaaatccgaaatattcgctcgcagattaagtatgcgcctttggttgcaaattat
aaaatttacgttattgacgaagcgcatatgttgtcgctcggtgcttttaatgctttatta
aaaacactagaagagccgccttcatatgcgatttttattctggcaactaccaatcctcaa
aagatccctgcaacgataatttctcgacttcaaaaatataattttcatcgcctttcgaat
gaagatctaaccaatcagcttgattttattttaaaaaaagaaaatattgaatatgataaa
tcagcgattgattcagttgctcagctggcaaatggcggcatgcgagatgcattaagtatt
ttagatcaggcagtaacattaagtaatggcaagatcactttagatttagtcaatgaacta
actggttcaacgactaaagatttgttatttcagtatttgaaatcaattcatgatggcgat
gtaaaaagtgcagttgaagaaattgaccaaattattcatgaaggaaaagatttagctcaa
ttcattcatgaattcattattttaataaaagatattctacttttaaaaaacaatattaat
ccagtttcttttacctcagaggagctagagcaatttaaagaaattccagcagcttggttt
tatcaagcactcaaagttcttaacgatgaagatcagcgcttaaaaaagaccgtttatgct
gatcttttgattgaaattatgacaattgaattgtctgatctaacatcaatcgcgaaaaca
acttcagtacagtctgaacagccaccaaaacaggttgaacaaattccaaaaataacgata
aaacagccagagaagaaggttgaatttaagccaattgaacagcaagttgaagtggctgag
acaaaagagagcgattcttctataactggtacgttcattaactatgaaggaatggatcag
gtgttaaaaaatgctactcgtcagtcactcgaacagttgaacgagaaatgggaagaggta
attaatgaagcggacggagagttagcagctttaatcaagtatactcatccggtagctgca
tctaacgatggagccattatctcatttaaatttttgcaatttttacaaaaattagatcaa
aggtcagatttacaagcagatttacaagaattgacgggcaatcttaaaatcatgggaatt
tctgatgaagagtggccagaatatcgtaaaaattacattatttctttaaaacaaggtaaa
gttaaaccagaagaaactaatcaagaggttaataatgaaaaagagtcagctgttaaggaa
gaccattcagaattaacttctaatatggaggcaattattaagtttttaggacctgaaaac
gtaaaaataattgatgattaa
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