Xylocopilactobacillus apis: KIMC2_15320
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Entry
KIMC2_15320 CDS
T09716
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
xak
Xylocopilactobacillus apis
Pathway
xak02020
Two-component system
xak02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KIMC2_15320 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KIMC2_15320 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xak03021
]
KIMC2_15320 (rpoN)
Transcription machinery [BR:
xak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KIMC2_15320 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
HTH_23
HTH_21
LacI
HTH_3
DUF6471
Motif
Other DBs
NCBI-ProteinID:
BDR56970
LinkDB
All DBs
Position
complement(1629831..1631117)
Genome browser
AA seq
428 aa
AA seq
DB search
MALKQSYQINQKQLHRLALTQSMKQSILILQTNLLDLTDYAQELSMANPLFDVNPTISKQ
EVEMSTAADIGSNEQQTVYSYLLDQVHLTMRDTPLRNVVLDLIDCLDEHGYLIFSDHELL
NKLSINRITLMDAKELLYNLDPPGVGAQSLLECLSLQLQFKTATPGTTLALDILEHCYDE
LLDHKWDEIASNLNVSHDEVKSAFKIIQTLTPYPFTEDFNQNNYIIPELILKIDGDKLSL
EVTKYGYPNIVFEKETYDELKKSTDQEVKSYLKLKYEEYQTLQRNLNRRVETIAMIGRCI
VEAQAQFLMQKSKTLNPLLLRDVAQKLNINQSTVSRTINGKYLQTDFGVFELKYFFTKRS
NPDSGQSVGQVQEKIKKLIDQEQKAHPLSDQKISEALAEQGIKIARRTVTKYREQLGINS
ASKRKTLE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaaacaaagttatcaaataaatcagaaacaacttcatagattagctttgact
caaagcatgaaacaatcgattttaatcctgcagactaatttgttggacttaactgactat
gcgcaagaattaagcatggctaatccattgtttgatgtaaatcctactatttcaaagcaa
gaagtagagatgtcgacagcagcggatatcggttccaatgaacagcaaaccgtctacagt
tatcttttagatcaagttcacttaacgatgagagatacgccattacgtaatgttgtttta
gatttgatcgattgtttagatgagcatgggtacttgatattttccgatcatgaattattg
aataaattatcaattaaccgaattactctaatggatgctaaagaattattgtataattta
gatccgccaggagttggtgcccagtcgctgcttgaatgtttgtcattacaattacaattt
aaaactgcaacaccgggaactactctggctttagatattttggagcattgttacgatgaa
ttacttgatcataaatgggatgaaattgctagtaatttaaatgtgtcgcatgatgaagta
aagtctgcttttaaaataattcaaactctaaccccatacccatttaccgaagatttcaat
cagaataattacattattcctgaactaattttaaaaatagacggcgataagttatcgctg
gaggtaactaagtatggataccctaacattgtttttgaaaaagagacttatgatgagtta
aagaaaagcactgatcaagaagtgaagtcctatttaaaactcaagtatgaggagtatcaa
actttacagcgaaatcttaatcgaagagttgaaacaattgcaatgattggacgttgtatt
gttgaagcccaagcacaatttttgatgcaaaagtcaaaaactcttaatcctttattgtta
agggatgttgctcaaaagttaaatattaaccaatcaacggttagtcgcacaataaacggc
aaatatttacagacagattttggcgtatttgagttaaaatatttctttaccaagcgcagt
aatcctgactccggtcaatcagttgggcaggttcaagaaaaaataaagaaattaattgat
caagaacaaaaagctcatcctttaagtgatcaaaaaatttctgaagctttagcagaacaa
ggaataaaaattgcccgtcgaacggtaacaaaatatagagaacaattaggaattaatagt
gcgagtaaaagaaaaactcttgaataa
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