Xylocopilactobacillus apis: KIMC2_17580
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Entry
KIMC2_17580 CDS
T09716
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xak
Xylocopilactobacillus apis
Pathway
xak03030
DNA replication
xak03430
Mismatch repair
xak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIMC2_17580 (holA)
03430 Mismatch repair
KIMC2_17580 (holA)
03440 Homologous recombination
KIMC2_17580 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xak03032
]
KIMC2_17580 (holA)
03400 DNA repair and recombination proteins [BR:
xak03400
]
KIMC2_17580 (holA)
Enzymes [BR:
xak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIMC2_17580 (holA)
DNA replication proteins [BR:
xak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KIMC2_17580 (holA)
DNA repair and recombination proteins [BR:
xak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KIMC2_17580 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BDR57196
UniProt:
A0AAU9DG18
LinkDB
All DBs
Position
complement(1871568..1872575)
Genome browser
AA seq
335 aa
AA seq
DB search
MDLSSYLKEIKKSPAVIYLLKGDEAVLYADLRQKTQQIAALQQAEFTSFDFAEDPVERFL
VELDNSSLFTKRRYLYLEHFFSNFKKQFSTKEANFFEERLRGSLPEVTLIFSSSGETIDR
RLSINKLITRNASVVELEKLKPNELRSKMVNYFQKRPEIEVDKSTIEEILSRTNFDYTAL
RAELPKLELFLANTNKLSSDDVKSLITASLDDNVFGLIGALSSKKFNDVMQIYRDLLDYF
GQPYVLNGALINNFQILLQVKILNDSGYDQGQMQKKLGGIHPYRIKLALQNSQYFSLTQL
IKINHLLLVMDQKIKTSTVSYDELFSDLVLQLKER
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagtagttatttaaaagaaataaaaaaaagccccgccgtaatttatttatta
aagggggacgaagcggttttatatgctgatttacgtcaaaaaactcaacaaattgcagcc
ttgcagcaagcagagtttacatcttttgattttgcagaggatccggttgagcggtttttg
gttgaacttgataattcaagcttatttactaaacgaagatatttatatctggaacacttt
ttttctaatttcaagaaacaattctctacgaaagaggctaatttttttgaagaacgttta
agaggatcgctgcccgaagtgaccttaatttttagttcaagcggtgaaacgattgatcgc
aggctttcaattaataaattaattaccagaaatgctagtgtcgttgagcttgaaaagcta
aagcctaatgaattaagatcaaaaatggttaactattttcaaaagagacctgaaattgaa
gtagataaatcaacgattgaggaaattttatcacgcacaaattttgattacacggcgcta
agagcagaacttccaaaattagaacttttcttagctaataccaacaaattatcatcagat
gacgtaaaaagtctaatcacggcaagtcttgatgataatgtttttggtctaattggcgcg
ttaagctcaaagaagtttaatgatgtaatgcaaatctatcgagacttgttggattatttt
gggcagccgtatgttttaaatggagcgttaatcaataattttcaaattttgctgcaggtt
aagattttaaatgattctggctatgatcaaggacaaatgcagaaaaaacttgggggcatt
catccatatcgaattaaattggccctacaaaacagtcaatatttttcgctcacccagctc
atcaaaattaatcatctcttgttggtgatggatcaaaaaattaaaaccagcactgttagt
tatgatgaattatttagcgacttagtgctccaattaaaagagcgttaa
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