Xylocopilactobacillus apis: KIMC2_18080
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Entry
KIMC2_18080 CDS
T09716
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xak
Xylocopilactobacillus apis
Pathway
xak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KIMC2_18080 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xak03021
]
KIMC2_18080 (rpoA)
03400 DNA repair and recombination proteins [BR:
xak03400
]
KIMC2_18080 (rpoA)
Enzymes [BR:
xak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KIMC2_18080 (rpoA)
Transcription machinery [BR:
xak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KIMC2_18080 (rpoA)
DNA repair and recombination proteins [BR:
xak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KIMC2_18080 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BDR57246
UniProt:
A0AAU9CXU2
LinkDB
All DBs
Position
complement(1921292..1922233)
Genome browser
AA seq
313 aa
AA seq
DB search
MIEFEKPSIARIEETSNYGKFIIEPLERGYGTTLGNSLRRVLLTSLPGSAVTDIQIDNVY
HEFSTVDGVLEDVSHIILNVKKLKLKLIDVDEKVIELKIKGEKVVTAADIVTDSDLEVLD
PDQYICSVAKGGELSMHMTVKKGRGYIAAVENKTEGMPIGVLAVDSIYTPIEKVNYQVES
TRVRNRNDFDKLTLDIWTNGSIMPSEALSLAAKILTDHLAIFVELDGDAGSVETLVEKED
KHIEKLLDMTIEEIDLTVRSYNSLKRAGINTLGELTQMTESDMMKVRNLGRKSLEEVKAK
LASLGLSLKKEDE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatttgaaaaaccatcaatcgcaaggatagaggaaacctcaaattatggtaag
tttatcattgaacccttagaacggggttatggtactaccttaggcaattctttgcgcaga
gttttattgacctctttgccgggttctgcagtaactgacattcaaattgataatgtttac
catgagttttcaacggtagatggagtcttagaagatgtttcacatattattcttaatgtt
aaaaaacttaagctaaagttaattgatgttgacgaaaaagttattgagttaaaaattaag
ggtgaaaaagtcgttacagcagcagatattgtgacagattcagatcttgaagtcttggat
ccggatcaatatatttgttcagtcgctaaaggcggagaactgtcgatgcatatgactgtc
aaaaaaggacgtggttatattgctgcggtagagaataaaactgaaggtatgccaattggg
gttttagcagtcgattcgatctatacaccgatcgaaaaggttaattatcaagttgaaagt
acgagagttagaaatcgaaacgattttgacaaattgacacttgatatatggactaatgga
tcgattatgccatcggaagctttaagtttagctgctaagattttaactgatcatttagca
atttttgttgaacttgatggagatgctggcagcgttgaaactttggttgaaaaggaagat
aagcatattgagaaattactcgatatgacaatcgaagaaattgatttaactgttcgttct
tataacagtttaaagagagctggaatcaatactctgggtgagttaactcaaatgacagag
tcagatatgatgaaagttcgaaaccttggacgtaagtctttagaagaagtcaaagctaaa
ctagcaagtttaggattatcacttaagaaggaggatgaataa
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