Xanthomonas albilineans: XALC_0026
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Entry
XALC_0026 CDS
T01160
Symbol
recC
Name
(GenBank) probable exodeoxyribonuclease v, gamma chain protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xal
Xanthomonas albilineans
Pathway
xal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XALC_0026 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xal03400
]
XALC_0026 (recC)
Enzymes [BR:
xal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XALC_0026 (recC)
DNA repair and recombination proteins [BR:
xal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XALC_0026 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CBA14572
UniProt:
D2U882
LinkDB
All DBs
Position
complement(30970..34533)
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AA seq
1187 aa
AA seq
DB search
MQYCGIAYTRRGAAALYMRQQGSAQLTAMDLSPPLRSHAALPQRIRHNAGNMHVTSAPDF
RLYPSNALDTLAALLAEELRRPLPEQPLLAPEVVLIPQVAMRRWLQSTLAATHGVAANLQ
FLTPGEFVAHALERNLGAADDDLDMTSLHWRLYAALRSDLGADPTLAPLAAYLADDDPLK
PWTLAGELGNVFEKYQAWRRDWLLRWEAGADPDDVQARLWRRIASGRAYRARRIGHYLDR
YARPDGPLPQGLPPRLFAFAVLNISPDVLRVLATQARVGTLHFYLPTPTQGYWGDLQTLW
QRRRAGTAVDLFAEQIQENPLLQAWGAAGRDFMALIGDYEVVHPLAEIAVYADPLESGQR
PLADGGLGDSLLRRMQSDLFQRRAPRSPAALPTVDKHDPSLQVHACHTRLRELQVLHDQL
RALLDDPRLDPPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALADASPLASEPL
AEVFLALLGLPIARFGLHEILDLIASAPIAEAAGLDTAGLDRLRGWLHAAGARWGLDAAH
RRQHQAPADDAYTWRFALDRLLLGHASGAEDDIDGVAPWPQLEGSALAALDTLLRLLRVL
DRHQAALAEPMPPAQWRECLLALLDALLPQTPSAPRAQRALERLRTLIDQFARDAARAEY
TAAVPAEVVRAHFTAVLGESDTRAPLLTGGISFGRMVPMRLLPFRAICLLGMNDGDFPRR
DPAAGLNRLTAELGTARRRHGDRSTREDDRFLFLQLFASAQDVFYLSYLGADARDGSVRE
PSPLVGELLACAAQYHAEPAAATTLVVRHPLQPFAAAAFGAIGAEAADPRRFSYRRQWRP
AVDSLIGQRQPLPPWIPETLPAMADDALPTSLSIDELRRFLLDPAEQFLRQRLGLRLPDP
AQADSDLEPLVAPTRGLDKYGLQQQVFEALLREETDGLYERLRARALLPSGPLGRHQLDQ
HLRQLRPYADAFGHWCGATPAPPAARLHVHIDGTELHGRLSDWYAAGVGRVKIGALSGRS
AIRHGLEWLLLRAAGEGAPFVRFFEHEDGLGPHPLDPERLSSTQAQQALTDLLRLYRQGQ
QTPLAFVPYSSWAYYQAARGGDLDKAIKNAAAQWQAGFSWREADRPQLRLVCRGRDPFAD
PQRFAAFASTSQHIFGLLERGDPGAALDPEHLLESWQRWHGTQEDAE
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtattgtggcatcgcctacactcggcgcggcgcggcagccctgtacatgcggcag
cagggatcggcccagctgaccgcgatggatctgtcgccaccgctgcggtcgcacgcggcg
ttgccgcaacgcatccggcacaatgccgggaacatgcacgtgacgtccgcgcccgatttc
cggctgtatccctccaacgcgctggataccctggccgctctgctcgccgaagagctgcgt
cggccactgccagagcaaccgctactggcgcctgaagtggtgttgatcccgcaggtggcg
atgcggcgttggctgcagtccacgctggccgccacacacggggtcgcggcgaatctgcaa
ttcctgacacccggcgagttcgtcgcgcacgcgctggagcgcaatctcggcgccgcagac
gacgacctggacatgaccagcctgcactggcgcctgtatgcggcgctgcgcagcgatctc
ggcgccgacccgacgctggcaccgctggccgcttacttggccgacgacgatccgctcaaa
ccatggaccctggccggcgaactgggcaacgtattcgagaaataccaggcttggcgccgc
gactggttgctgcgctgggaagccggtgccgatccggacgacgtacaggcacgactgtgg
cgccgcatcgccagcggccgcgcctaccgcgcacggcgtatcggccactatctggaccgc
tacgcacggcccgacggtccgctgccgcagggcttgccaccacggctgttcgccttcgcc
gtgctcaatatctctcccgacgtgctgcgcgtgctggccacccaggctcgggtcggcaca
ctgcacttctatctgccgacaccgacgcagggttactggggcgacctgcaaacactgtgg
cagcgccgccgcgcgggcaccgcggtggacctgttcgccgaacaaatacaggaaaatccg
ctgctgcaagcctggggcgccgccgggcgcgacttcatggccttgatcggcgactacgag
gtggtgcatccgctggccgagatcgcggtctacgccgatccgctcgaatcgggccagcgt
ccgctcgccgacggcggcctcggcgacagcctgctgcggcggatgcaaagcgacctgttc
cagcgccgcgcaccgagatcaccggccgcgttgccgacggtggacaagcacgatccaagc
ctgcaggtgcacgcctgccatacccgtctgcgcgaactgcaggtgctgcacgaccaattg
cgcgcattgctggacgacccgcgcttggatcccccgctgcaaccgcgcgaaatcgcggtg
ctttccccgaacatcgatccatacgtcccatacctggacgcggtgttcggcagccacggc
aacgacgacgccttgccctacgccctggccgacgccagcccgctggccagcgagccgctg
gccgaggtattcctggccttgctcggcttgccgatcgcgcgcttcggcctgcacgaaatc
ctcgacctgatcgccagcgcgccaatcgccgaagccgccgggctggacaccgccggattg
gaccgcctgcgcggctggctgcacgcggccggcgcgcgttggggcctggacgcggcacac
cggcgccaacaccaggcgccggccgacgacgcctacacctggcgcttcgccctggaccgg
ctgctgctcggccacgccagcggcgccgaggacgacatcgacggcgtcgccccatggcca
cagttggaaggcagcgcactcgcagcgctggacacgctgctgcggctgctgcgcgtcctc
gaccgccaccaggccgcgctggccgagccgatgccgccggcgcaatggcgcgaatgcctg
ctcgccctgctcgacgccttactgccgcaaacgccatcggcgccacgcgcgcagcgcgcc
ctggaacggctgcgcacactgatcgaccagttcgcgcgcgacgcagcgcgcgccgagtac
accgccgcagtgccagccgaggtggtgcgcgcgcatttcaccgccgtgctgggcgagtcg
gacacccgcgcaccgttgctcactggcggcatcagcttcgggcgtatggtgccgatgcga
ttgctgccgttccgcgcgatctgcctgctcggcatgaacgacggcgatttcccgcgccgc
gatccagccgccgggctcaaccggctcaccgccgaactgggaaccgcacgccgccgccac
ggcgaccgctccacccgcgaagacgaccgtttcctgttcctgcaattgttcgcctcggcg
caggacgtgttctatctgagctatctcggtgccgatgcgcgcgatggcagcgtccgtgaa
ccttcgccgctggtcggcgaactgctggcctgcgcagcgcagtaccacgccgaaccggcg
gcagccaccacgctggtggtgcgccatccactgcaacccttcgccgcggccgccttcggc
gccatcggtgcggaagcggccgacccacgccgtttcagctatcgtcggcaatggcgacca
gcggtggacagcctgatcgggcagcgccagccgctgccaccgtggattcccgaaacactg
cccgccatggccgatgacgcgctgccgacgtcactgtccatcgacgaactgcggcgtttc
ttgctcgatcccgccgaacagttcctgcgccagcgcctgggcttgcgcctgcccgatccg
gcgcaggccgacagcgacctggaaccgctggtggctccgacgcgcgggctggacaagtat
ggtttgcagcaacaagtgttcgaggcgctactgcgcgaagaaaccgacggcttgtacgaa
cgcttgcgtgcccgcgcgttgctgccatccgggccactggggcggcaccagctcgatcag
cacctgcgccagttgcgcccctatgcggacgcgttcggacactggtgcggcgcgacaccg
gcaccgccagcggcgcgtctgcacgtccacatcgacggcaccgaactgcatggccgcctc
tcggattggtacgccgcaggggtggggcgggtcaagatcggcgcattgagcgggcgcagc
gcgatccgccacggcctggagtggctgttgctgcgtgccgccggcgaaggcgcgccattc
gtgcgtttcttcgagcacgaggacggtctcggcccgcatccgctggaccccgaacggttg
tcgtcaacgcaggcgcaacaggcactgaccgacttattgcgactgtatcgccaaggccag
cagacaccgctggcgttcgtgccttacagcagttgggcgtattaccaggccgcacgcggc
ggcgatctggataaagcgatcaagaacgccgccgcgcaatggcaggcaggcttcagctgg
agggaggcggatcgcccacaattgcgcctggtctgtcgtggtcgcgatccgttcgccgac
ccgcagcgcttcgccgccttcgccagcaccagccagcacatcttcggcctgctcgaacgc
ggcgatcccggcgcggcgctcgaccccgagcatctgctcgaaagctggcagcgctggcac
ggtacgcaggaggatgccgaatga
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