Xanthomonas albilineans: XALC_0119
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Entry
XALC_0119 CDS
T01160
Symbol
polA
Name
(GenBank) probable dna polymeraseIprotein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xal
Xanthomonas albilineans
Pathway
xal03030
DNA replication
xal03410
Base excision repair
xal03420
Nucleotide excision repair
xal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XALC_0119 (polA)
03410 Base excision repair
XALC_0119 (polA)
03420 Nucleotide excision repair
XALC_0119 (polA)
03440 Homologous recombination
XALC_0119 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xal03032
]
XALC_0119 (polA)
03400 DNA repair and recombination proteins [BR:
xal03400
]
XALC_0119 (polA)
Enzymes [BR:
xal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XALC_0119 (polA)
DNA replication proteins [BR:
xal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XALC_0119 (polA)
DNA repair and recombination proteins [BR:
xal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XALC_0119 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XALC_0119 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CBA14665
UniProt:
D2U921
LinkDB
All DBs
Position
152206..154974
Genome browser
AA seq
922 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAAGEPTGALFGVVNMLRATLKERPEYVAFVVDAPG
KTFRDALYPQYKANRPPMPDELRAQVEPMCQIVHALGITILRESGVEADDVIGTLALQGV
GDGMDVTISTGDKDFAQLVRPGVQLVNTMSGSRMDSDAAVMEKFGVLPHQIVDLLALMGD
TIDNVPGVEKCGPKTAAKWLADYGSLDGVIANADAIKGKIGDNLRAALGRLPLNRDLVTI
KTDVVLSGGPRTLGLREPEPEQLRGLYQRYGFTQALRDLDGGVAAPYVASEASPSLRGTA
AGYARAAAAPDGALDPALAAKGHYAAVTTAEQFDALLARLRAADGFAFDTETDALDAMRA
NLVGLSFAIEPGHADYLPLGHDYPGAPVQLDRVQALAALAPLLEDPAKRKVGQHGKYDLH
VLRRHGVQVHGYADDTMLESFVLNSTASRHDMDSLAKRYLGYDTVKYEDVAGKGAKQIAF
SQVAIDDATGYAAEDADITLRLHRALSAQLDAEPALARVYREIEMPLVPVLTRIEANGVC
VDIAELRKQSQVLSQRMLAAQQKAVALAGRSFNLDSPKQLQAVLFDELKLPALLKTPKGQ
PSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPETGRVHTSYHQAGAAT
GRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSEDPGLLRA
FSQGVDVHRATAAEVFGRTLEQVSANERRAAKAINFGLMYGMSAFGLARNLGIGRGEAQD
YVALYFSRYPAVRDFMERMREQARTQGYVETLFGRRLYLNDINAKQQGLRAGAERAAINA
PMQGTAADIIKRAMVSVDTWLQDHRARALMILQVHDELVFEVDADFVEILLPEVTWRMAA
AAELKVPLVVDSGVGDNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccgattagtcctgatcgacgggtccagctacctgtatcgcgcgtttcacgcgctc
ccgcccttgaccaatgccgccggtgaacccaccggcgcactgttcggcgtggtcaacatg
ttgcgcgccaccttgaaggagcgtcccgagtacgtcgccttcgtggtggatgccccgggc
aagaccttccgcgacgcgctgtacccgcagtacaaggccaaccgtccgccgatgcccgac
gagctgcgcgcgcaggtcgagccgatgtgccagatcgtgcacgcactcggcatcaccatt
ttgcgcgagagcggagtggaggccgacgatgtgatcgggaccttggccctgcaaggcgtt
ggcgatggcatggatgtgaccatctccaccggcgacaaggatttcgcccagttggtgcgt
cccggcgtgcagttggtcaacaccatgagcggcagccgcatggattcggatgcggcggtg
atggaaaaattcggtgtgttgccgcaccagattgtcgatctgctggcgctgatgggcgac
accatcgacaacgtccccggggtggagaagtgcggacccaagaccgcggccaaatggctg
gccgattacgggtcgctggacggggtaatcgccaacgccgacgcgatcaagggcaagatc
ggcgacaacctgcgcgcggcgctggggcgactgccgctcaaccgcgatctagtcacgatc
aagaccgacgtggtgctgtccggcggcccgcgcacgctgggcctgcgcgagccggagccg
gagcagttgcgcggcttgtaccagcgctacggcttcacccaggcgttgcgcgacctggac
ggtggcgtggcggctccgtatgtcgccagtgaggccagtcccagcctgcgcggtaccgcg
gctggctatgctcgtgccgccgccgcgcccgatggtgcgctggacccggcgttggccgcg
aagggccactacgccgcggtcaccactgccgaacagttcgatgcgttgctggcgcgcttg
cgcgccgccgacggcttcgccttcgacaccgagaccgacgccttggacgcgatgcgcgcc
aatctagtcggacttagcttcgccatcgaacccggtcatgccgattacctgccgctgggt
cacgactatcctggtgcgccagtgcagttggaccgcgtgcaggcgctggcggcgctcgca
ccgctgttggaagatccggccaagcgcaaggtcggccagcacggcaagtacgacctgcat
gtgctgcgccgccacggcgtgcaggtgcacgggtatgccgacgacaccatgctggagagt
ttcgtgctcaactccaccgccagccgccacgacatggactcgctggccaagcgctacctg
ggctacgacacggtcaagtacgaggacgtggccggaaagggggccaagcagatcgcgttc
tcgcaggtggccatcgacgatgccaccggctatgccgccgaagacgccgatatcacgctg
cgcttgcaccgggcgttgtcagcgcaattggatgccgagccggcgctggcgcgggtgtac
cgcgagatcgaaatgccgctggtgccggtgctgacccgcattgaggccaacggtgtgtgc
gtggatatcgccgagctgcgcaagcagagccaggtgctgagccagcggatgctggccgcc
cagcaaaaggcggtcgcgttagccgggcggagtttcaatctggattcgccaaaacagtta
caggcggtgttgttcgacgaactgaagctgcccgccctgttgaaaactcccaaaggccag
cccagcaccaatgaagaagcactggaggctatcgccgaccagcatgaactgccgcgggtg
atcctggaataccgcggcctggccaagctgcgcagcacttacaccgacaagctgccggag
atggtcaaccctgagaccgggcgcgtacacaccagctatcatcaagccggtgccgcgacc
gggcggctgtcctcttccgatccgaacctgcagaacatcccgatccgcaccgaggatggc
cgccgcatccgtcgcgccttcgtcgcccctcccggccgcaagctgatcgcgtgcgactat
tcgcaaatcgaactgcggatcatggcgcacctgtccgaggatccgggcctgttgcgcgct
ttcagtcaaggcgtggacgtgcatcgcgccaccgccgccgaggtcttcgggcgcaccttg
gagcaggtcagcgccaacgagcgccgcgccgccaaggcgatcaatttcggcttgatgtac
ggcatgagcgcgttcggcctggcgcgtaatctcggcatcggccgcggcgaggcgcaggac
tacgtggcgttgtacttcagccgctacccggcggtgcgcgatttcatggagcgcatgcgc
gagcaggcgcgcacccagggctacgtggagaccctgttcggtcgccgtctgtacctgaac
gacatcaacgccaagcagcagggcttgcgcgctggcgccgagcgcgccgcgatcaacgcg
ccgatgcagggcaccgctgcggacatcatcaagcgcgccatggtcagtgtggacacgtgg
ttgcaggatcaccgcgcgcgtgcgttgatgatcctccaggtacacgacgaactggtgttc
gaagtcgacgccgacttcgtcgagatcctgttacccgaggtgacctggcgcatggccgct
gcggcagagttgaaggtgccgttagtggtggacagtggcgtgggcgataactgggacgag
gcgcattga
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