Xanthomonas albilineans: XALC_0437
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Entry
XALC_0437 CDS
T01160
Name
(GenBank) hypothetical protein
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
xal
Xanthomonas albilineans
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xal03019
]
XALC_0437
03016 Transfer RNA biogenesis [BR:
xal03016
]
XALC_0437
Enzymes [BR:
xal01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
XALC_0437
Messenger RNA biogenesis [BR:
xal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XALC_0437
Transfer RNA biogenesis [BR:
xal03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
XALC_0437
Prokaryotic type
XALC_0437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
MG2
Motif
Other DBs
NCBI-ProteinID:
CBA14972
UniProt:
D2UBT0
LinkDB
All DBs
Position
complement(491374..491763)
Genome browser
AA seq
129 aa
AA seq
DB search
MSHSIKFALLAALFVSTHVQAYQSPTHCSILPNYIRDASRDMAYCLTMPSPIAACGNAQL
DVQVFGNNEGRLPKSGNGQTYYEGKARLPQNDQAGTYRLVFLVTDGKKKKAIEQRYYSAD
HYATFCTIQ
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactcgattaaatttgcgctgcttgcggccttattcgtttccacccatgtacag
gcgtatcaatctccaacgcactgcagcatcttgcctaattacatccgcgatgccagtcgc
gacatggcgtattgcctcaccatgcccagcccgatcgccgcttgtggtaacgcacagttg
gacgtgcaggtgttcggcaacaacgaaggacgcttgcccaagtccggaaacgggcagacc
tattatgaaggcaaggcaaggctccctcagaacgatcaggccgggacgtatcggctggtg
ttcctcgtcaccgatggcaaaaagaaaaaggcgatcgagcagcgttactactccgccgac
cattacgccacattctgcacgatccagtga
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