Xanthomonas albilineans: XALC_0590
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Entry
XALC_0590 CDS
T01160
Symbol
hupB
Name
(GenBank) probable dna-binding protein hu (histone-like protein hu)
KO
K03530
DNA-binding protein HU-beta
Organism
xal
Xanthomonas albilineans
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xal03032
]
XALC_0590 (hupB)
03036 Chromosome and associated proteins [BR:
xal03036
]
XALC_0590 (hupB)
03400 DNA repair and recombination proteins [BR:
xal03400
]
XALC_0590 (hupB)
DNA replication proteins [BR:
xal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XALC_0590 (hupB)
Chromosome and associated proteins [BR:
xal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XALC_0590 (hupB)
DNA repair and recombination proteins [BR:
xal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XALC_0590 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Phage_sheath_domII
Lmo2446-like_N
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CBA15114
UniProt:
D2UBL0
LinkDB
All DBs
Position
644322..644594
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AA seq
90 aa
AA seq
DB search
MNKAELNDAIAAAADISKAEAGRAVDAFVSEVTKALKKGDSVTLVGFGTFQVRDRAERTG
RNPKTGDSIKIAASKNPTFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagccgaactgaacgacgctatcgccgctgctgccgatatttccaaggccgaa
gctggtcgtgccgtcgatgccttcgtgtccgaagtcaccaaggcgttgaagaagggtgac
agcgtgaccctcgtgggcttcggcaccttccaggtgcgtgatcgggccgagcgcaccgga
cgcaacccgaagaccggcgactccatcaagatcgctgcgtcgaagaacccgaccttcaag
gctggcaaagcgctgaaggatgccgtaaactaa
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