Xanthomonas albilineans: XALC_0866
Help
Entry
XALC_0866 CDS
T01160
Name
(GenBank) putative rhamnogalacturonase b protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xal
Xanthomonas albilineans
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XALC_0866
Enzymes [BR:
xal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
XALC_0866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
CBA15384
UniProt:
D2UCZ7
LinkDB
All DBs
Position
complement(982335..983939)
Genome browser
AA seq
534 aa
AA seq
DB search
MRTFFPLILCCIAVGGALPAAAQNGTFGLSHSGGRFVVDSGANLVFSVDDSNGDLVSMRY
RGTELQSTEAKGSQIASGLGTATVAARTVGDTIVISAQAGDLIHYYMAHKGRNAIYMATY
APTLLPIGELRFVTRLNVNILPNADHEPDSNVGTAIEAQDVFLLPDGRTSSKFYSARRAI
EDSIHGVSGTNVAVRMWMGNREYSSGGPFFKDIATQKTVVTHELYNYMFSNHTQTESYRG
GLHGVYALLFTDGGAAPAAATDLSFVDATLKLKGFLDSTGRGTVSGQASGVADGQPAVVG
LSNDHAQYWASADSTGQFKIAGVCPGHYRITLYQNELEVAHDTLEVAAGSTAQATLQAVP
LQGQVQWQIGLPDGTPGAFRNASLLPTMHPSDQRMASWGPLTYRVGTNALEDFPAVQWHG
VNAPTRIEFVLGADQVRDYRLRMFVPLTQASARPQVSVNDQWTGPMPPRPDQPNSRGITR
GTYRGNNTVYLVDIPATALQAGLNWVDIDVVSGSPDNGFLGPAVVFDSVQLIVP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtaccttcttccccctgatcttgtgttgtatcgcagttggcggtgcactgccagcc
gccgcccagaatggaaccttcggcctaagccacagcggtgggcgcttcgtcgtcgatagt
ggtgccaacctggtgttcagcgtggatgacagcaatggcgacttggtgtcgatgcgctat
cgcggcaccgagttgcagagcaccgaggccaagggttcgcagatcgcctcaggactcggc
acggcgaccgtggcggcacgcaccgtgggcgacaccatcgtgatctcggcacaggcaggc
gacctgatccattactacatggcgcacaaaggccgcaatgcgatctacatggcaacctat
gcgccgaccttactgccgatcggcgaattgcgcttcgtcacacggctcaatgtcaacatt
ctgccgaatgccgaccacgaacctgattccaacgtcggcaccgcgatcgaagcccaggac
gtgtttttgcttccagacggccgcaccagttccaagttctattcggcgcggcgtgcaatc
gaggacagcatccatggcgtgagcggtacgaacgtggccgttcgcatgtggatgggcaat
cgcgaatacagctccggcggcccattcttcaaagacatcgccacacaaaagaccgtcgtg
acccacgagttgtacaactatatgttttccaaccacacccagaccgagtcctatcgcggc
ggcctgcatggcgtgtatgccctgctgttcaccgacggtggcgcagcgcctgccgcggcg
accgatctgagcttcgtcgacgcgacgctgaaactaaaaggcttcctggatagcaccggc
cgcggcacggtatctggtcaggcctcgggcgttgcggacgggcaaccggcagtggttggc
ctgagcaacgaccatgcgcagtactgggcaagcgcggactccacaggtcaattcaagatt
gccggcgtgtgtcctggacactatcgcatcacgctttaccaaaacgagcttgaagtggcg
cacgacacgcttgaggtcgctgctggcagcaccgcgcaggcgacattgcaggcggtgccg
cttcagggccaggtgcagtggcagatcggcctgcccgatggtacgcccggcgctttccgc
aacgccagtctgttgccaacgatgcatccgtccgaccagcgcatggcgtcctgggggccg
ctgacctaccgcgtgggaaccaacgctctggaggatttcccggcagtacagtggcacggc
gtcaacgcccccacgcgcattgaattcgtcctcggcgccgaccaagtccgcgactatcgc
ttgcgcatgttcgtcccactgacacaggccagcgcgcgcccacaagtgagcgtcaacgat
caatggactggcccgatgccaccacggcccgatcagccgaacagtcgtggcatcacccgc
ggcacctatcgtggtaacaacaccgtgtaccttgtcgacatcccggctacggccttgcag
gccggtctaaattgggtggacatcgacgtcgtctcgggttcgccggacaacggcttccta
ggcccggctgtcgtcttcgacagcgtgcagttgatcgtgccataa
DBGET
integrated database retrieval system
