Xanthomonas albilineans: XALC_0983
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Entry
XALC_0983 CDS
T01160
Symbol
truA
Name
(GenBank) probable trna pseudouridine synthase a (trna-uridine isomeraseI (trna pseudouridylate synthaseI protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
xal
Xanthomonas albilineans
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xal03016
]
XALC_0983 (truA)
Enzymes [BR:
xal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
XALC_0983 (truA)
Transfer RNA biogenesis [BR:
xal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XALC_0983 (truA)
Prokaryotic type
XALC_0983 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CBA15500
UniProt:
D2UCB6
LinkDB
All DBs
Position
1110091..1110864
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AA seq
257 aa
AA seq
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MRYALGVEYDGSAFQGWQQLGESGGPSVQATLQGALSSVADVPVSVVCAGRTDAGVHGEC
QVVHFDCAALRPPRGWMLGATARLPPSVCVRWCVPVADDFHARFSARARRYRYRLLNRQV
RPALYRQTLSWERRPLQVEAMHIAAQALLGEQDFSAFRSVQCQALHARRELQSIVVTRNG
ELVEFQLQANAFLHHMVRNIVGSLVMVGTGEKPVSWIGELLSGRNRRIAGPTASPQGLVF
VGPLYPAHWTLPDEVTL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacgcgttaggcgtggaatacgacggcagtgcgttccaggggtggcagcaactt
ggcgaatccggtggcccgagcgtccaggcgacgctgcagggggcactgtcgtctgtggcc
gatgtgccggtgagtgtggtgtgcgccggtcgtaccgatgccggtgtgcatggcgagtgc
caggttgtgcatttcgattgcgctgcgctgcggcccccacgtggctggatgttgggtgct
acggcgcgcttaccgccctcggtgtgcgtgcgctggtgcgtgccggtcgcagacgatttc
catgcgcggttttccgcgcgtgcgcgtcgttaccgctaccgtctgctcaaccgccaggtg
cgtccagccttgtaccggcagacgctgagctgggagcggcggccactgcaggtcgaggcg
atgcatatcgccgcgcaggcgttgctgggcgagcaagacttcagcgcgttccgcagcgta
cagtgtcaggcactgcatgcgcgtcgcgaattgcagtcgatcgtggtcactcgcaacggt
gaactcgtcgagttccagctccaggccaatgcattccttcatcacatggtgcgcaatatc
gttgggtcgcttgtcatggtcggaacgggcgaaaagccggtgtcctggattggcgaactt
ctatccggacgcaatcgccgtatcgccggtccgaccgcgtcgccgcaggggctggtcttc
gtcggtcccctctatcccgcccattggacgcttccggatgaggtcaccctatga
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