Xanthomonas albilineans: XALC_1018
Help
Entry
XALC_1018 CDS
T01160
Symbol
truB
Name
(GenBank) probable trna pseudouridine synthase b protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xal
Xanthomonas albilineans
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xal03016
]
XALC_1018 (truB)
Enzymes [BR:
xal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XALC_1018 (truB)
Transfer RNA biogenesis [BR:
xal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XALC_1018 (truB)
Prokaryotic type
XALC_1018 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CBA15533
UniProt:
D2UCR4
LinkDB
All DBs
Position
1146437..1147363
Genome browser
AA seq
308 aa
AA seq
DB search
MPLIGPRLPRIAFRRLDGIVLLDKPAGMSSNAALQAARRLFRAEKGGHTGSLDPLATGLL
PLCFGEATKLAGLLLGSAKAYEAEIVLGVTTDSDDADGAVLRTRPLPPLDAATLRAALAP
LRGRIRQRAPIYSALKQGGEPLYAKARRGETIEAPEREVEVQAIEVLAHVGERLRLHVVC
GSGTYIRSLARDLGETLGCGAHIAALRRLWVEPFRTPQMVTLERLQQLAAQDPAALDALL
LPLAAGLADFPPLRLDGAAAQRFRMGQRLRDASWTPGLAAVFDAEGEPLGLGQVDAGGLL
APQRMFNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcatcggccctcgactgccccgcattgccttccgccgtctcgacggcatcgtg
ctgctggataagcctgccggcatgagttccaacgcggcgctacaggcggcgcgacgcctg
ttccgcgcggagaaaggtggtcacaccggcagcctggatccgcttgccaccggcctgctg
ccgctgtgcttcggcgaggcgaccaagctggccgggttgttgctcggctcggccaaggcg
tatgaggccgagatcgtgctcggggtgacgacagacagcgacgatgccgatggtgcggtg
ttgcgcacccgtccgctgccgccgctcgacgcggccacgctgcgggcggcactggcgccg
ctgcgcggacgcatccgtcagcgtgcgccgatctattcggcgctcaaacaggggggtgag
ccgctgtacgcgaaggcgcgccgcggcgaaaccatcgaggcacccgaacgtgaggtcgag
gtacaggccatcgaggtactcgcccatgtcggcgagcgcctgcgcttgcatgtggtatgc
ggctccggcacctacatccgcagtctggcccgcgacctgggcgagacgctgggctgcggc
gcgcacattgccgcgctgcggcgtttgtgggtggagccgttccgcacgccgcagatggtc
accctggagcggttgcagcaacttgccgcgcaggatcctgccgctttggacgcgctgcta
ttgccgttggcggccggtctggcggatttcccgccgctgcggctggatggcgctgcggcg
cagcggtttcgaatggggcagcgcctgcgcgatgcatcgtggacgccgggtctggcagcg
gtgttcgacgccgagggcgagccgctgggattgggtcaggtcgatgccggtggactgttg
gcgccgcagcggatgtttaatctgtga
DBGET
integrated database retrieval system
