Xanthomonas albilineans: XALC_1442
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Entry
XALC_1442 CDS
T01160
Symbol
trmU
Name
(GenBank) probable trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase protein
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
xal
Xanthomonas albilineans
Pathway
xal04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
XALC_1442 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xal03016
]
XALC_1442 (trmU)
Enzymes [BR:
xal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
XALC_1442 (trmU)
Transfer RNA biogenesis [BR:
xal03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
XALC_1442 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Motif
Other DBs
NCBI-ProteinID:
CBA15949
UniProt:
D2UDC2
LinkDB
All DBs
Position
complement(1667893..1669086)
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AA seq
397 aa
AA seq
DB search
MSTTRIMVGVSGGVDSSVAAWQLVQQGHTVSGLFMQNWADDGNGDVHDSASIAEDRKPKA
TTCRAEADRRDAVAVCGMLGIPFHFRDFSKEYWQGVFAHFLAEYAAGRTPNPDVLCNREV
KFKHFLDAARDLGAERIATGHYARVAFVDRRWRLLRGLDRNKDQSYFLHQLGQAQLAATL
FPVGELPKEQVRRIARQAGLPTHAKKDSTGICFIGERDFRTFLSRYLPARRGEIRDPHEQ
IVAEHPGVFYFTLGQREGLNIGGVRGRAAAPWYVIGKDVARNVLYVDQDRDSPHLMATQL
RSESAHWIAGAPPARHFACRAQTRYRQADEPCMVEIRDDGTLTVQFTRPQRAVTPGQSLV
LYQGEECLGGAVIATTDAPLERRLAQRTPATHEDTNR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaacacgcatcatggtcggcgtctccgggggggtggattcgtcggtagcggct
tggcaactggtgcaacaggggcacacggtttctgggctgttcatgcagaactgggcagac
gacggcaacggcgatgtgcacgacagcgcgagcatcgctgaagacagaaaaccaaaagcg
accacatgccgcgccgaagcagaccgacgcgatgcggtggcggtctgcggaatgctcggc
attccattccattttcgcgacttctccaaagaatactggcaaggcgtattcgcacacttc
ctcgccgaatacgccgctgggcgcactcccaacccggacgtactatgcaatcgcgaggtc
aagttcaagcatttcctagacgcggcacgcgaccttggcgccgagcggatcgcgaccggc
cactacgcgcgggtggcattcgtcgatcgccgttggcggctgctgcgcgggctggatcgc
aacaaggaccaaagctatttcctgcaccagttgggccaggcacaactcgctgcgaccctg
tttcccgtgggcgagctgcccaaggaacaggtgcgacgcatcgcccgccaggcgggtttg
ccgacccacgccaagaaggactccactggcatctgcttcatcggcgaacgcgacttccgc
acattcctcagccgctacctgccggcccggcgcggcgagatccgcgacccgcacgagcag
atcgtggccgagcaccccggcgtgttctatttcaccctgggccagcgcgaaggcctaaac
atcggtggcgtacgtggccgcgccgcagcgccgtggtacgtgatcggcaaggatgtggcg
cgcaatgtgctgtacgtcgaccaggaccgcgacagcccccatctgatggccacacaactg
cgctcggaaagcgcccattggattgccggcgcaccgccagcgcggcacttcgcatgtcgt
gcgcaaacccgctaccggcaagccgacgaaccgtgcatggtcgagatccgcgatgatggc
actctgacggtacagttcacgcgtccgcaacgggccgtgactccggggcaatctctggtg
ctgtaccagggcgaggagtgcctgggcggagccgtgatcgccaccaccgatgccccgctg
gagcgccgcctggcgcagcggacgcctgcaacacacgaggacaccaaccgatga
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