Xanthomonas albilineans: XALC_1647
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Entry
XALC_1647 CDS
T01160
Symbol
orn
Name
(GenBank) probable oligoribonuclease protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xal
Xanthomonas albilineans
Pathway
xal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
XALC_1647 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xal03019
]
XALC_1647 (orn)
03009 Ribosome biogenesis [BR:
xal03009
]
XALC_1647 (orn)
Messenger RNA biogenesis [BR:
xal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XALC_1647 (orn)
Ribosome biogenesis [BR:
xal03009
]
Eukaryotic type
Pre-60S particles
RNases
XALC_1647 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CBA16145
UniProt:
D2UDT5
LinkDB
All DBs
Position
complement(1947293..1947865)
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AA seq
190 aa
AA seq
DB search
MAENQAANDRLIWIDLEMTGLDTERDSIIEIATVVTDAQLNVLAEGPEFAIAHPLQTLEA
MDEWNRNQHRQSGLWQRVLDSQVGLAQAEAQTMAFLTQWCKPGASPMCGNSICQDRRFLH
RQMPRLERFFHYRNLDVSTLKELARRWAPTVSSGLVKTSSHTALSDVHDSIAELRYYRPF
MGALGGQGVG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaaccaagcggcgaacgatcgactgatctggatcgatctggaaatgaccggt
ttggataccgaacgcgactcgatcatcgagatcgccacggtggtcacggatgcgcaactc
aacgtgttggcggaagggccggagttcgccatcgcgcatccgttgcagacgctggaagca
atggacgagtggaaccgcaatcagcaccgtcagtccgggctgtggcagcgcgtgctcgac
agtcaggtcggcctggcccaagccgaggcgcagacgatggcgtttctgacacagtggtgc
aagcctggcgcctcgccgatgtgcggcaactcgatctgccaggatcggcgcttcctgcac
cgccagatgccacgactggagcgtttcttccactaccgcaatctggacgtgtccacattg
aaggaactggcgcggcgttgggcgccgacggtgtccagcgggctcgtcaagacttcctcg
cataccgcgctcagcgacgtgcacgactccatcgccgaactgcgctactaccggccgttc
atgggggcgttgggcggtcagggtgtcggctaa
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