Xanthomonas albilineans: XALC_1884
Help
Entry
XALC_1884 CDS
T01160
Name
(GenBank) hypothetical adhesin transmembrane protein
KO
K21449
trimeric autotransporter adhesin
Organism
xal
Xanthomonas albilineans
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xal02000
]
XALC_1884
Transporters [BR:
xal02000
]
Other transporters
Pores ion channels [TC:
1
]
XALC_1884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
CBA16373
UniProt:
D2UEA4
LinkDB
All DBs
Position
complement(2200181..2204347)
Genome browser
AA seq
1388 aa
AA seq
DB search
MKTPYSNSWNAVVGHAKMILKLDACAVVAGSGIDPRRRSRLTASALALALASAGCSATCW
ASVFAPINSSGTVTTCNSGAGVLVGRNNPGATNAYPVDGSGTYANVAGCNATGAGLDAVS
IFGSFGQATGAGASVFGFQSTAARWASAFGLQTQASGIASTALGFGSNATALNSVAIGGA
GGAGGVGTLPLSQANSTTASGDGSVAIGSNSTSGAQASGTGAIAIGGQSVSSASNTIAIG
TNAQATVIAAVAMGTNAMAAQQAVAIGNNAVANALLATALGNAATASGTGSVVVGSGAND
NGATSSVVIGRGASIAAGIAGVSVALGQGSRVTSAGVGTTGTTLNGTTYSFAGTSPVGTL
SVGSAGNERTLTNLAAGQIGGSSTDAVNGSQLFATNSAVQSLGSTVNSINNGLGIKYFHG
NSTQTDATATGTDSVAIGPVSNAQGVSGIAIGNAAQSGTTGKNVAIGATASANSGTTAGG
AVAIGLSQNASGDGAVAIGDPNVSNGTGAVAVGADNTAAGDTAGNTAANGAVAIGNANSA
IGQGAVALGNGSTAGAASAIALGDTATANGSNAIALGGSSTASAQRAVAIGNSSTAGGTN
AVALGFSTTANGLGSVVIGSGASDNGITSSVVIGRGASITAGVTGVNVALGQGSSVTATA
VGTTGTTLNGTTYSFAGTLPVGTLSVGSASNERTLTNLAAGQVSASSTDAVNGSQLFATN
SAVQSLGSSLGNINNGGGIKYFRSNSTQADATATGTDSVAIGPVSTASAQSAVALGNASS
AGAQNALALGFSTTANGVGSVVAGSGASDNGVTSSVVVGRGASITAGVTGGNVALGQGSR
VTATAVGTTGTTINGTAYSFAGTLPVGTLSVGSASNERTLTNLAAGQVSASSTDAVNGSQ
LFATNSAVQSLASTVQTTTIHYYSANDNGVAGSNFANDGATGGNATAVGKNALASGQGAF
AAGLGASASIDNSIALGSGAVSNRAVAAATGTIPAGSSLISYNTTDRTLLGALSLGSSTS
YRQITNVADGTQAQDAVTVRQLAGSLQSFAVTPIQYFHANSTATDALAVGAESVAVGPQT
VVNGDNGIGVGNGAVVQQTAPGGIAIGQGANVQLADAVALGTAASAAATQGVAVGAGSKV
SQAGGVALGAGAVASTAAGAAGYVPSNATASQSAAINATTSTLASVSVGNAANGAYRQIN
GVAAGSQDSDAVNVAQLKGVQSQVQQVQNGSVGYDTNADGSINYQSLTLGRGNAAGVSAP
VTVHNVAAGTATTDAVNVGQLNAGVQAAKDWSKTYTDQRFASLDSNIGKVSERANAGTAA
AMAMASLPQAYQPDQNAMAVALSSYHGQSGIAIGLSTVSESGSWVYRLSASSNSRGDTGA
SIGAARFW
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgccatacagcaatagctggaacgcagtcgttggacacgcaaagatgatcttg
aaactggacgcgtgtgctgtcgtggccggcagcggcattgacccgcggcgtcgatcgcgg
ttgaccgcatccgcgctggcgctggcgctggcaagtgcgggttgctcggcgacgtgctgg
gccagcgtctttgccccgattaattccagtggcacggtcactacctgtaactctggcgca
ggcgttctcgtcggcaggaacaatcctggggccaccaatgcctacccggtcgatggctcg
ggcacctatgcaaacgtggccggttgcaatgcgaccggtgccggcctggatgcggtcagt
attttcggtagcttcggtcaggcgacgggtgccggcgcttccgtgttcggtttccagtcc
acggccgcgcgctgggcatcggcctttggcctgcagactcaggctagcggtatcgccagc
accgcgttgggtttcggcagcaatgccactgcattgaacagcgttgccatcggcggtgcc
ggcggcgctggcggcgtggggacactcccgctgtctcaggccaattcgacgactgcttcg
ggagacggttcagtggcaattggcagtaattccaccagcggcgcgcaggcctctggcacc
ggcgccatcgccatcggtggccagtcggtgtcgtcggccagtaacaccatcgccattggc
acgaatgcccaggccacggtgatcgctgcggtagcgatgggcaccaatgcgatggctgca
cagcaagccgtggcgatcggcaacaatgcggtcgccaatgcgctgctggcaacagcgtta
ggtaatgcagcgaccgcaagcggtacgggctcggttgtggtcggcagcggcgccaacgac
aatggcgccaccagcagcgtggtgatcggccgtggcgcgagcatcgccgccggcatcgct
ggtgtcagcgtggcgttggggcagggcagcagggtgacctccgcgggggttggtaccacg
ggtaccacgctcaatggaaccacctattccttcgcggggacctcgccggtcggtacgctc
agcgtgggcagcgctggcaacgagcgcacgctgaccaatctggccgcggggcagatcggg
ggcagcagcactgatgctgtcaatggcagccagttgttcgccaccaacagcgccgtgcag
agcttgggcagcaccgtgaacagtatcaataatggtctaggcatcaagtatttccatggt
aattcgacgcaaaccgatgcgaccgccaccggcacggacagcgtggcgatcggtccggtc
tccaatgcgcagggcgtgtcgggtatcgccatcggcaatgccgctcaatccggcaccact
ggcaagaacgtggcgatcggcgccacggcgtcggccaatagcggcacgacggcgggcgga
gcggtggcgatcggcctgagtcaaaacgccagtggcgacggcgcggtggcgattggcgat
cccaacgtctccaacgggaccggcgcggtggcggtgggcgcggacaacacggctgccggt
gataccgctggcaacaccgcggccaacggcgcagtcgccatcggtaatgccaatagtgcg
atcgggcaaggcgcggtggcattgggcaatgggtccaccgccggtgcggcgagcgccatc
gcgctgggcgataccgcgacggccaacggctcgaacgccatcgcgctaggcggtagctcc
accgccagtgcgcaacgtgcggtggcgattggtaactcctccaccgccggtggcaccaac
gcggttgcactgggtttctccaccactgcaaatggtctgggttcggtggtgatcggcagc
ggcgccagcgacaatggcatcaccagcagcgtggtgatcggccgcggcgcgagcatcacc
gcgggcgtcaccggggtcaacgtggccttggggcagggcagtagcgtgactgcgacggcg
gtcggcaccacgggcaccacgctcaacgggacgacctattccttcgcggggactttgccg
gtcggcacgctcagcgtgggcagcgccagcaatgagcgcacgctgaccaatctggccgcg
ggtcaggtcagcgccagcagcacggacgccgtcaatggcagccagttgttcgccaccaac
agtgccgtgcagagcttgggcagtagcctgggtaatatcaataacggcggcggcatcaag
tatttccgtagtaattcgacgcaagccgatgcgaccgccactggcacggatagcgtagcc
atcggtccggtctccaccgccagtgcgcagagtgcggtggcactgggcaacgcttccagc
gccggtgcacaaaatgcgctcgcgctgggtttttccaccaccgcgaatggtgtgggttca
gtggtggccggcagcggtgccagcgacaatggcgtcaccagcagcgtggtggttggccgc
ggcgcgagcatcaccgcgggcgtcaccgggggcaacgtggcgttgggccagggcagcaga
gtgaccgcaacggcggtcggcaccacgggcaccacaatcaacgggaccgcctattccttc
gccgggaccttgccggtcggcacgctcagcgtgggcagcgccagcaatgagcgcacgctg
accaatctggccgcgggtcaggtcagcgccagcagcacggacgccgtcaatggcagccag
ttgttcgccaccaacagtgccgtgcaaagcctggccagcacggtgcagaccacgaccatc
cattactacagtgccaacgacaacggcgtggccggcagtaatttcgctaacgatggcgcc
accggtggcaatgcgacggcggtggggaagaatgcgctggcctcgggccagggagcgttt
gcggctggcctgggcgcatcggccagcatcgacaacagcatagcgctggggtccggtgcc
gtctccaatcgtgccgtggccgccgctaccggcaccattcccgcgggaagttcgctgatc
agttacaacaccacggaccgcactttgctcggtgcgctcagccttggcagcagcaccagt
tatcggcagatcaccaatgtcgccgacggcacgcaagcgcaggatgcggtgaccgttcgt
cagttggccggctcgctgcaatcctttgcggtgaccccgatccagtatttccatgccaac
tccaccgcgaccgatgcattggcggtgggcgccgaatcggtggcggtggggccgcagacc
gtggtcaatggcgataacggcatcggtgtcggcaatggcgcggtcgtgcagcaaaccgca
ccgggcggcatcgcgatcggtcagggcgccaatgttcagctggccgatgcggtggcattg
ggcacggcggcatcggcggcggccacacaaggtgtggcggttggtgctggcagcaaggtg
agccaggcaggtggcgttgcgttgggcgcaggcgcggtggcctccactgccgccggtgcg
gcggggtatgtgcccagcaatgccactgccagtcagagtgcagcgatcaacgccaccacc
agtacgctggcgagtgtgtcggtcggcaatgcggccaacggtgcttatcgccagatcaat
ggggtggcggcaggttcgcaggacagcgatgcggtcaacgtggcgcagctcaagggtgtg
cagtcgcaggtgcagcaggtgcagaatggttcggtcggctacgacaccaatgccgatggc
agcatcaattaccagagcctgaccctggggcgtggcaatgccgccggagtcagtgctccg
gtgaccgtgcataacgtggccgcgggtacggcgacgaccgatgcggtcaacgtcggccaa
ctcaatgcgggtgtccaggccgcgaaggattggtcaaagacttataccgatcaacgtttc
gcaagcctcgacagcaatatcggcaaagtcagtgaacgcgccaatgccggcactgcggcc
gcgatggcgatggcgagcctgccacaggcctaccagccggatcagaacgccatggcggtg
gcattgagtagctaccacggacaaagcggtatcgcgatcggcctttccacggtttccgaa
agcggcagttgggtttaccggcttagcgccagttccaacagccgtggcgataccggtgcg
tcgattggtgcggcacggttctggtag
DBGET
integrated database retrieval system
